Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0396 ATGTGGAAGAGAACGGGTTTTGAAGAAGAAGCAGTTCAATTGATCAACTCAGATTTCAGGGACCTAAGTCTAGCTGCTAATAGACTCGCCCATCATGCCATCAAACTTGGTGGCATTGGCTTTGGAGCCTCTTTTTTCGGATTGTTTGCTGCCATTGCTGCTATTTATCTGTTGATTTTGGATCGTACAAACTGGAAAACAAATATTCTCACAGCACTACTCATTCCATACATTTTCTTCAGCTTGCCTTCATTAATTTTCGACGTCTTCAGGGGAGAGCTTGGAAAATGGATTGCTGCAGTTGCTGTTGTATTACGCCTTTTCCTTCCAAGACACTTCCCTGATTGGCTGGAATTGCCTGGTGCTCTGATTCTTCTTATCGTTGTAGCTCCTTCTCTAATTGCAAGCACCTTTAGAGACAACATTGTTGGGGTGGTAGTGTGCCTCATCATTGCATGTTATTTGCTGCAAGAACACATTCGGGCTTCTGGTGGTTTCAGAAACTCCTTCACTAAAGCTCACGGCATATCAAATTCCATTGGCATAATACTTCTGTTGGTTTATCCCATCTGGGCGCTGGTGGTCATACTTTTTTAG 597 0.4288 MWKRTGFEEEAVQLINSDFRDLSLAANRLAHHAIKLGGIGFGASFFGLFAAIAAIYLLILDRTNWKTNILTALLIPYIFFSLPSLIFDVFRGELGKWIAAVAVVLRLFLPRHFPDWLELPGALILLIVVAPSLIASTFRDNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGISNSIGIILLLVYPIWALVVILF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0396 198 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 3 197 IPR008892 GO:0016021
Gso12g0396 198 Pfam Cold acclimation protein WCOR413 9 185 IPR008892 GO:0016021
Gso12g0396 198 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 3 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0396 Gso-Chr12 3480138 3483333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0396 - - gmx:100811430 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0396 12 3480138 3483333 Gso11g1051 11 9362988 9366062 GST