Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1051 ATGTGGAAGAGAAGGGGATTTGAAGAAGAAGCAGTTCAATTGATAAACTCAGATTTCAGAGACCTAAGTCTAGCTGGCATAGGCTTTGGAGCCTCTTTCTTCGGATTCTTTGCTGCCATTGCTGCTATGGGAGAGCTTGGAAAATGGATTGCTGCAGTTGCTGTTGTATTACGACTTTTCATTCCTAGACACTTCCCTGATTGGCTGGAATTGCCAGGTGCTTTGATTCTTCTTATCGTCGTAGCTCCTTCTCTAATTGCAAGCACTTTTAGAGACAACATTGTTGGGGTGGTGGTGTGCCTCATCATTGCATGCTATTTGCTGCAAGAACACATTCGGGCTTCTGGTGGTTTCAGAAACTCCTTCACTAAAGCTCACGGCGTATCAAATTCCATCGGCATAATACTTCTGTTGGTTTATCCCATCTGGGCACTGGTTGTCATACTTTTTTAG 453 0.4393 MWKRRGFEEEAVQLINSDFRDLSLAGIGFGASFFGFFAAIAAMGELGKWIAAVAVVLRLFIPRHFPDWLELPGALILLIVVAPSLIASTFRDNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGVSNSIGIILLLVYPIWALVVILF* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1051 150 Pfam Cold acclimation protein WCOR413 44 137 IPR008892 GO:0016021
Gso11g1051 150 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 44 149 IPR008892 GO:0016021
Gso11g1051 150 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 44 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1051 Gso-Chr11 9362988 9366062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1051 - - gmx:100811430 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0396 12 3480138 3483333 Gso11g1051 11 9362988 9366062 GST