Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0392 ATGGATGGACTACCTGGCTCTGTGGGCACCAGCGCTAGCTTCAGTCTGAGATTGGGTCAGACCATGTTCTCTTCTGCTTCCCTTCTCTTTATGTCTCTGGGGGTTGAATTCTACAGCTACACGGCTTTCTGCTATTTGGTGACAATTATGGGGTTGGTTATACCATGGAGTTTCACATTAGCATTGGTAGATGGATATTCTGTTCTGGTCAAATGCCCCATTCGTCAACCAGGAATACTGTTGATTATTGTTGTGGGAGATTGGGTATTATCAACCCTCACACTAGCAGCAGCTTGCTCAACAGCTAGTGTTGTGGATCTCCTTCTCAACACCCATGGGTCTTTTTGCCCTCCAAAGCTTTGTAGCAGGAGCAAAGTACATCTCGAGTGCAATGAAAGTCATGCTCAGCTTCATAGCAGCTGCCAAAGATGA 432 0.463 MDGLPGSVGTSASFSLRLGQTMFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILLIIVVGDWVLSTLTLAAACSTASVVDLLLNTHGSFCPPKLCSRSKVHLECNESHAQLHSSCQR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0392 143 PANTHER CASP-LIKE PROTEIN 5C3 1 127 - -
Gso12g0392 143 Pfam Casparian strip membrane protein domain 9 121 IPR006702 -
Gso12g0392 143 PANTHER CASP-LIKE PROTEIN 5B3 1 127 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0392 Gso-Chr12 3450369 3455689 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0392 - - gmx:100791311 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0392 12 3450369 3455689 Gso11g1047 11 9338512 9341004 GST