Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1047 ATGGATGAATTACCTGGCTCTGTGGGCACCAGCGCTAGCTTCAGTCTGAGATTGGGCCAGACCATGTTCTCTTCTGCTTCCCTTCTCTTTATGTCTCTGGGGGTTGAATTCTACAGCTACACGGCTTTCTGCTATTTGGTGACAATTATGGGGTTGGTCATACCATGGAGTTTCACATTAGCATTAGTAGATGGATATTCCGTTCTGGTCAAATGCCCCATTCGTCAACCAGGAATACTGTTGATTATCGTTGTGGGAGATTGGGTATTATCAACCCTCATACTAGCAGCAGCTTGCTCAACAGCTAGTGTTGTGGATCTCCTTCTCAACACCCATGGGTCTTTTTGCCCTCCAAAGCTTTGTAGCAGGTACAGGATATCTGCAGTTATGGCTTTTTTGTCATGGTTTCTATCTATGGCATCCTCTCTATTTAACCTTTGGCTATTACCCTCTGTGATTCTCATTTAA 468 0.4444 MDELPGSVGTSASFSLRLGQTMFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILLIIVVGDWVLSTLILAAACSTASVVDLLLNTHGSFCPPKLCSRYRISAVMAFLSWFLSMASSLFNLWLLPSVILI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1047 155 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
Gso11g1047 155 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Gso11g1047 155 PANTHER CASP-LIKE PROTEIN 5C3 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1047 Gso-Chr11 9338512 9341004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1047 - - gmx:100810360 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0392 12 3450369 3455689 Gso11g1047 11 9338512 9341004 GST