Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0380 ATGGAGGGATACAAGATGAAGGTTATGATTGTGGGGATGGTGTTGGGCATGGTGATGATTGGGATGGCCAATGGGCAATATTACTCGTTTTGTCGCATGCCCAGCGATGGGATGGCGGCATGCAAGCCGAGTGTGAGTGGAGACAACCCTGTTGATCCTTCCACTGATTGCTGCTCAGCCATTGCTAAGGCTGATCTTAAATGCTTCTGCCGCTACAAGGATTCGGGACTTCTCTCTATGTATGGCGTTGATCCCAACAAGTGCATGGAACTCCCTGTTAAATGCAAGGTTGTGGACTCTTTCCACTGCTAG 312 0.4968 MEGYKMKVMIVGMVLGMVMIGMANGQYYSFCRMPSDGMAACKPSVSGDNPVDPSTDCCSAIAKADLKCFCRYKDSGLLSMYGVDPNKCMELPVKCKVVDSFHC* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0380 103 PANTHER LIPID TRANSFER PROTEIN 1 103 - -
Gso12g0380 103 Gene3D - 28 103 IPR036312 -
Gso12g0380 103 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 101 IPR036312 -
Gso12g0380 103 SMART aai_6 31 103 IPR016140 -
Gso12g0380 103 Pfam Probable lipid transfer 28 102 IPR016140 -
Gso12g0380 103 CDD nsLTP_like 31 103 IPR044741 -
Gso12g0380 103 PANTHER LIPID BINDING PROTEIN-RELATED 1 103 IPR039265 GO:0005504|GO:0009627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0380 Gso-Chr12 3343292 3344163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0380 30 103 Acyl Lipid Metabolism Gene Families AT5G48485 41.892 6.52e-17 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0380 - - gmx:100305636 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0380 12 3343292 3344163 Gso11g1029 11 9205310 9206028 GST