Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1029 ATGATAATGGAGGGATACAATAAGAAGGTTATGATTGTGGGGATGGTGTTGGGCATGGCCATGATTGGGATGGCCAATGGCCAATACTCGTTTTGTCGCATGCCCAGCGATGGGTTGGCGGCATGCAAGCCGAGTGTGAGTGGGGACTATCCTGCTGATCCCTCCACTGCTTGTTGCTCAGCCATTGCCAAGGCTGATCTTAAATGCTTCTGCCGCTTCAAGGATTCGGGCCTTCTCTCTATGTATGGTGTTGATCCCAACAAGTGCATGGAACTCCCTGTTAAGTGCAAGGTTGTCGACTCTTTCCACTGCTAG 315 0.5079 MIMEGYNKKVMIVGMVLGMAMIGMANGQYSFCRMPSDGLAACKPSVSGDYPADPSTACCSAIAKADLKCFCRFKDSGLLSMYGVDPNKCMELPVKCKVVDSFHC* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1029 104 Gene3D - 29 104 IPR036312 -
Gso11g1029 104 Pfam Probable lipid transfer 18 103 IPR016140 -
Gso11g1029 104 PANTHER LIPID TRANSFER PROTEIN 3 104 - -
Gso11g1029 104 PANTHER LIPID BINDING PROTEIN-RELATED 3 104 IPR039265 GO:0005504|GO:0009627
Gso11g1029 104 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 102 IPR036312 -
Gso11g1029 104 CDD nsLTP_like 32 104 IPR044741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1029 Gso-Chr11 9205310 9206028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1029 31 104 Acyl Lipid Metabolism Gene Families AT5G48485 40.541 2.13e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1029 - - gmx:100527769 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0380 12 3343292 3344163 Gso11g1029 11 9205310 9206028 GST