Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0376 ATGATTGGGCGCAGAGACAGAGAGGGACCCTTGATGAGGAACAACAGTACTAACTCTCTTCGCAAATCACGGGTCCTAACCGCAGTTGCAATTGGTGTCCTTGTTGGATGCGTCTTCGCTTTCTTGTTCCCCAATGGCTTCTTCGTTTCTGACTCTGCTGCCACTAATCATCATCTCCCTCTCGCGGGATCTAAGACCCAGGAAAATTCAGCTGGATGTGAATCCACGGATCGGGTCAACATGTTGAAATCAGAGTTTGTGGCGGTATCAGAGAAAAATGCTGAGCTTAAAAAACAGGTGAGGGAATTGACTGAAAGGCTTCGGCTTGCAGAGCAAGGGAAAGACCAGGCTCAAAAGCAGTTCCTTACATTAGGAAAACAACCTAAAGCTGGACCTTTTGGTACTGTAAAGGGATTAAGAACCAACCCTACTGTTGTTCCTGATGAATCTGTAAATCCAAGATTGGCAAAGATATTAGAGAAAGTTGCAGTCAAACGAGAGCTTATAGTTTGTCTTGCAAACACCAATGTGAAGGAGATGCTGGAGGTCTGGTTCACCAATATCAAGAGAGTTGGCATAACCAATTATCTAGTTGCTGCTTTAGACGATGAGACTGCAAAGTTTTGTGAATCAAATCAAGTCCCAGTGTATAAAAGAGATCCAGATGATGGTGTTGATATCATTGGAAGAACAGGGAGCAACCATGCTGTCTCTGGTCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATATAGCGTTCTTCTATCAGATGTTGATATTGTACATTTGCAGAATCCTTTTGATCATCTATACCGTGATTCAGACGTGGAGTCCATGAGTGATGGTCATGATAACATGACAGCTTATGGCTATAATGATGTGTTTGATGAGCCTACAATGGGTTGGGCTCGATATGCTCATACAATGAGGATATGGGTTTATAACTCTGGATTCTTCTATATCAGACCAACAATCCCTTCAATTGAGCTTTTGGACCGCGTGGCAACACGACTTTCAAAGGAGAAAGCATGGGACCAGGCGGTTTTCAATGAGGAACTGTTTTACCCCTCATTTCCTGGTTATGATGGGCTTCATGCTGCCAGAAGAACTATGGATATGTATCTCTTCATGAATAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTAAGCAAATTGAAGCCAGTAATTATTCATGTGAATTACCAACCTGATAAGCTTCCCCGAATGAAAGCAATTGTTGAATACTATGTTAATGGGAAGCAAGATGCTCTCAAACCTTTCCCTGATGGCTCAGATTGGTAA 1317 0.4244 MIGRRDREGPLMRNNSTNSLRKSRVLTAVAIGVLVGCVFAFLFPNGFFVSDSAATNHHLPLAGSKTQENSAGCESTDRVNMLKSEFVAVSEKNAELKKQVRELTERLRLAEQGKDQAQKQFLTLGKQPKAGPFGTVKGLRTNPTVVPDESVNPRLAKILEKVAVKRELIVCLANTNVKEMLEVWFTNIKRVGITNYLVAALDDETAKFCESNQVPVYKRDPDDGVDIIGRTGSNHAVSGLKFRILREFLQLGYSVLLSDVDIVHLQNPFDHLYRDSDVESMSDGHDNMTAYGYNDVFDEPTMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFYPSFPGYDGLHAARRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYQPDKLPRMKAIVEYYVNGKQDALKPFPDGSDW* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0376 438 Pfam Nucleotide-diphospho-sugar transferase 193 411 IPR005069 -
Gso12g0376 438 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 367 IPR029044 -
Gso12g0376 438 Coils Coil 79 120 - -
Gso12g0376 438 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 13 435 - -
Gso12g0376 438 PANTHER ARABINOSYLTRANSFERASE RRA3 13 435 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0376 Gso-Chr12 3306130 3308961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0376 K20783 - gmx:100804189 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0376 12 3306130 3308961 Gso11g1024 11 9157375 9160434 GST