Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1024 ATGATTGGGCGCAGAGACAGAGAGGGACCCTTGATGAGGAACAACAGCACTAACTCTCTTCGCAAATCACGGGTCCTAACCTCAGTTGCAATTGGTGTCCTTATTGGATGCGGCTTCGCTTTCTTGTTCCCCAATGGCTTCTTCGTTTCCGACTCTGTTGCCCCTAATCGCCATATTCCTCTCGCTGGATCCAAGACCCAGAAAAATTCAGCTGGATGTGAATCCTCGGATCGGGTCAACATGTTGAAATCGGAGTTTGTGGCGGTATCAGAGAAAAATGCTGAGCTGAAAAAACAGGTGAGAGAATTGACTGAAAGGCTTCAGCTTGCGGAGCAAGGGAAAGACCAGGCTCAAAAGCAGTTCCTTACATTAGGAAAACAGCCTAAAGCTGGACCTTTTGGTACTGTAAAGGGATTAAGAACCAACCCTACTGTTGTTCCTGATCAATCTGTGAATCCAAGATTGGCAAAGATATTAGAGAAAGTTGCAGTTAAACAAGAGCTTATAGTTTGTCTTGCAAACACCAATGTGAAGGAGATGCTGGAGGTCTGGTTCACCAATATCAAGAGAGTTGGCATAACCAATTATCTAGTTGCTGCTTTAGACGATGAGACTGCAAAGTTTTGTGAATCAAATCAAGTCCCAGTGTATAAAAGAGATCCAGATGATGGTGTTGATACCATTGGAAGAACAGGGAGCAACCATGCTGTCTCTGGTCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATATAGCGTTCTTCTATCAGATGTTGACATTGTATATTTGCAGAATCCTTTTGATCATCTATACCGTGATTCAGACGTGGAGTCCATGAGTGATGGTCATGATAACATGACAGCTTATGGCTATAATGATGTGTTTGATGAGCCTACAATGGGTTGGGCTCGATATGCTCATACTATGAGGATATGGGTTTACAACTCTGGTTTCTTCTATATCAGACCAACAATCCCTTCAATTGAGCTTTTGGATCGTGTGGCAACACGACTTTCAAAGGAGCAAGCATGGGACCAGGCTGTTTTCAACGAGGAACTGTTTTACCCCTCACATCCTGGTTATGATGGGCTTCATGCTGCCAGAAGAACTATGGATAGGTATCAATTCATGAACAGCAAGGTCCTGTTCAAGACAGTGAGGAACGATGCTAGCCTCAGCAAATTGAAGCCAGTAATTATTCACGTGAATTACCACCCTGATAAGCTTCCCCGAATGAAAGCAATTGTCGAATACTACGTTAATGGGAAGCAAGAGGCTCTCAAACCTTTCCCTGATGGCTCAGATTAG 1314 0.4346 MIGRRDREGPLMRNNSTNSLRKSRVLTSVAIGVLIGCGFAFLFPNGFFVSDSVAPNRHIPLAGSKTQKNSAGCESSDRVNMLKSEFVAVSEKNAELKKQVRELTERLQLAEQGKDQAQKQFLTLGKQPKAGPFGTVKGLRTNPTVVPDQSVNPRLAKILEKVAVKQELIVCLANTNVKEMLEVWFTNIKRVGITNYLVAALDDETAKFCESNQVPVYKRDPDDGVDTIGRTGSNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHDNMTAYGYNDVFDEPTMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKEQAWDQAVFNEELFYPSHPGYDGLHAARRTMDRYQFMNSKVLFKTVRNDASLSKLKPVIIHVNYHPDKLPRMKAIVEYYVNGKQEALKPFPDGSD* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1024 437 Coils Coil 79 120 - -
Gso11g1024 437 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 367 IPR029044 -
Gso11g1024 437 Pfam Nucleotide-diphospho-sugar transferase 193 411 IPR005069 -
Gso11g1024 437 PANTHER ARABINOSYLTRANSFERASE RRA3 13 435 IPR044290 GO:0016757|GO:0080147
Gso11g1024 437 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 13 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1024 Gso-Chr11 9157375 9160434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1024 K20783 - gmx:100802215 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0376 12 3306130 3308961 Gso11g1024 11 9157375 9160434 GST