Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0316 ATGGTTTCTCTATTAAATCCAGAAGCACCGGAATATCTACCAAGCCACAACCACAAGCTTCAGCAACAGCAACAACAACTGCAACCCCTTGCTTGTCCCACTTCCTTATTTCCTCATCACGGCCACTTCTCAGTGTTCTCTTTATTTCCCTCACGACATCCTAACCCTTTCTTTTATTATCCCACTTTAACACTTCCACCACCACCTTCCATTCCATTAGCGCTAGAAGCTCATCAACAAACTCGTTTTCATAACATAAAAAATGATTCTGATTCTAACCCCGTTGAAGCACATGCAGTGCACCAGAAGAAGGATCAAGTGGTACTAGCCGAACCCAAAACTGGTGGTGGTTCGATAGGACTTGTAAAGAAGCAAGCTTTGAATGCTTACATTAATGGCCGCCGTTCTGCTGAGAGTTGGAGACAGAAGAGTTACCCACCGAGAAAGAAGGTGGAAGAAAATGGTCAACGCAAAAATGTTGACTTTTTGAGGAACCGAAAGGTTTTTAGGCAACCAGATGATGAACAACCCTTCAGGGGTTTTCCCAAGAGGAATCGTTTTAATCTCTCGTTGCCAGTTAGGGATGGCGAAACCACTGTAATGATCAGAAATATTCCCAGCAAATACACCCGAGAATTGCTGGTGGATTTTCTAGAAGATCATTGTCTGAAGGTGAATCGTGGAGATAAAGAGGCAGCTTTCAAGGGGAAAGACGAAGAACCCATTGGTTTAGCTTTTGATTTCGTTTATTTGCCCATTGATTTCAAAACTAGGATGAACAAGGGTTACGCTTTTGTGAACTTCACTCAGCCCCAGGCAGCTCGGAAGTTTCTTAAGACAGCCTCCAATTTGAAATGGGAGTTGTTCCAGTCTAACAAGATACGTGATGTGGTTTCTGCACGTTTGCAAGGGAAGGAACAATTGGAGGAACACTTCGCAACTATGAACTTTCCATATGAGTCCGAGGACGTTCTGCCGGTGTCCTTTAGCCCACCTTGTGATGGTGTAAACAAGGGAGAGCAAAGGACTATAGGGAATCTTACGAAGCGTCAACATGTTTGA 1062 0.4388 MVSLLNPEAPEYLPSHNHKLQQQQQQLQPLACPTSLFPHHGHFSVFSLFPSRHPNPFFYYPTLTLPPPPSIPLALEAHQQTRFHNIKNDSDSNPVEAHAVHQKKDQVVLAEPKTGGGSIGLVKKQALNAYINGRRSAESWRQKSYPPRKKVEENGQRKNVDFLRNRKVFRQPDDEQPFRGFPKRNRFNLSLPVRDGETTVMIRNIPSKYTRELLVDFLEDHCLKVNRGDKEAAFKGKDEEPIGLAFDFVYLPIDFKTRMNKGYAFVNFTQPQAARKFLKTASNLKWELFQSNKIRDVVSARLQGKEQLEEHFATMNFPYESEDVLPVSFSPPCDGVNKGEQRTIGNLTKRQHV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0316 353 SUPERFAMILY RNA-binding domain, RBD 192 285 IPR035979 GO:0003676
Gso12g0316 353 MobiDBLite consensus disorder prediction 1 25 - -
Gso12g0316 353 PANTHER RNA BINDING PROTEIN 54 342 - -
Gso12g0316 353 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 2 54 342 - -
Gso12g0316 353 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 198 295 IPR000504 GO:0003723
Gso12g0316 353 Gene3D - 129 311 IPR012677 -
Gso12g0316 353 Pfam RNA recognition motif 2 198 312 IPR007201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0316 Gso-Chr12 2817785 2819600 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0316 - - gmx:102668786 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0316 12 2817785 2819600 Gso11g0963 11 8617620 8619518 GST