Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0963 ATGGTTTCTCCACTGAACCCAGAAGCTCTGGAATATTTACCAAGGCACAATCACAAGCTTCAGCAACAACAACAGCAAGTACTTCAACCTCAACCCCTTCCTTGTTCCACTTTCCCTCCCACTTCCATTTTTACTCCTCACTGCAACTTCTTGTTACTGTTCTCTTCATTTCCCTCACGTCATCCTTATAACCCCTTCTATTATCCCACTCTAACACTTCCACCATTACCACCTTCTTCCATTCCCTTAGCACTAGAAGCTGATCAACCAACTCGTTTTCATGAAATAAAAAATGGTTCTGATTCTGATTCTGATTCTAACCCGGTTGAAGCACATGCAGTGAACAAGAAGAAGGATCAAATGGTAATAGCTGAAGAACCAAAAACTGGTTGTGGTTCGATAGGATTTGTAAAGAAGCGAGCTTTCAAGGCTTACATTAATGGCCGGTGTCTTGAGAGTTGGAGACAAAAGAGTTACCCGCCGAGAAGGAAGGTGGAAGAAAATGGTCAACGTAAAAGTGTTGACTTTTTGAGGAACCGAAAGGTTTTTAGGCACCACCCAGCAAATGAACCCTTCAGGGGTTTTCCCAAGAGGAATCGTTTTAATCCCTCGTTGCCTGTTAGGGATGGCGAAACCACTGTGATGATCAGAAATATTCCCAGCAAATACACCCGAGAATTGCTGGTGAAGTTTCTGGAAGATCATTGTCTGAAAGTGAATCGTACTACAGAAAATGAAGCTTGCAAGGAGAAAGGCGAAGAAGAATCCATTGGTTTAGCTTTTGATTTCGTTTATTTGCCCATTGATTTCAAATCTAGGATGAACAAGGGATACGCTTTTGTGAACTTCACTAAGCCCCAGGCAGCTCGGAAGTTTCGTAACACAGCCTCCAGATTGAAATGGGACATGTTCCAGTCTAACAAGATACGTGAAGTGGTTTCTGCACGTTTACAAGGGAAGGAACAATTGGAGAAACACTTCGAAACGATGAACTTTCCTTGTGACTCCGAGGATGTTTTGCCCGTGAGCTTTAGCCCACCTCGCGATGGTGTAAACAAGGGAGATCAAAGGACTATGGGGAATCTTATGAAGCGCCAACATGTTTGA 1107 0.4327 MVSPLNPEALEYLPRHNHKLQQQQQQVLQPQPLPCSTFPPTSIFTPHCNFLLLFSSFPSRHPYNPFYYPTLTLPPLPPSSIPLALEADQPTRFHEIKNGSDSDSDSNPVEAHAVNKKKDQMVIAEEPKTGCGSIGFVKKRAFKAYINGRCLESWRQKSYPPRRKVEENGQRKSVDFLRNRKVFRHHPANEPFRGFPKRNRFNPSLPVRDGETTVMIRNIPSKYTRELLVKFLEDHCLKVNRTTENEACKEKGEEESIGLAFDFVYLPIDFKSRMNKGYAFVNFTKPQAARKFRNTASRLKWDMFQSNKIREVVSARLQGKEQLEKHFETMNFPCDSEDVLPVSFSPPRDGVNKGDQRTMGNLMKRQHV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0963 368 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 212 316 IPR000504 GO:0003723
Gso11g0963 368 PANTHER RNA BINDING PROTEIN 114 357 - -
Gso11g0963 368 SUPERFAMILY RNA-binding domain, RBD 188 295 IPR035979 GO:0003676
Gso11g0963 368 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 1 114 357 - -
Gso11g0963 368 Pfam RNA recognition motif 2 212 327 IPR007201 -
Gso11g0963 368 MobiDBLite consensus disorder prediction 94 115 - -
Gso11g0963 368 Gene3D - 152 326 IPR012677 -
Gso11g0963 368 MobiDBLite consensus disorder prediction 345 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0963 Gso-Chr11 8617620 8619518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0963 - - gmx:102662025 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0316 12 2817785 2819600 Gso11g0963 11 8617620 8619518 GST