Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0311 ATGGCCTCTGCATCAGCATCTCTGCTCAAGTCTTCACTTGTTCTTGACAAGTCTGAGTGGGTGAAGGGACAAACCCTTCGCCAACCTTCTGCATCAGTTGTGAGATGCAACCCCACCACCCCATCAGGCCTCACCATCAGAGCTGGTTCCTATGCTGATGAGCTCGTTAAGACCGCGAAAACAGTGGCTTCACCAGGGAGGGGTATTTTGGCCATGGATGAGTCCAATGCTACCTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACTGAAGCTAACCGCCAGGCATACCGTACCCTCCTCGTGACAGTTCCAGGCCTTGGTCAGTACATCTCTGGTGCCATTCTCTTTGAGGAAACACTCTACCAATCCACAACTGATGGCAGGAAGATTGTTGACGTGCTGCTTGAGCAAAACATTGTTCCTGGTATTAAAGTCGACAAGGGTTTGGTGCCCCTTGCAGGTTCCAACGACGAGTCATGGTGCCAAGGTTTGGATGGTCTAGCCTCTCGCTCAGCTGCATACTACGAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCAGTTAAGGAAGCAGCCTGGGGTCTGGCTCGCTATGCTGCAATTGCTCAGGACAATGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGGGAGCATGGTATTGATAGAACTTTTGAAGTAGCCCAAAAGGTCTGGGCAGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTTTTTGAGGGTATTCTCCTTAAGCCTAGCATGGTTACACCTGGAGCCGAGTCCAAGGACAAGGCCAGTCCTCAGACAGTTGCTGATTACACCCTCAAGCTCCTTCACAGGAGAATTCCCCCTGCTGTCCCTGGAATTATGTTTTTGTCTGGTGGACAGTCTGAGGTTGAAGCTACCCTCAATTTGAATGCCATGAACCAATCTCCAAACCCGTGGCACGTGTCATTCTCGTATGCCAGAGCCCTCCAAAACACTGCCTTGAAGACATGGGGAGGCCGCCCAGAGAACGTGAAGGCAGCACAAGATGCACTCGCATTCCGTGCCAAGTCCAACTCACTCGCTCAGCTTGGGAAGTACACTGGTGAGGGTGAATCCGAGGAAGCCAAGAAGGAGTTGTTCGTCAAAAGCTACTCCTACTAA 1197 0.5163 MASASASLLKSSLVLDKSEWVKGQTLRQPSASVVRCNPTTPSGLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGQYISGAILFEETLYQSTTDGRKIVDVLLEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYEQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDKASPQTVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRPENVKAAQDALAFRAKSNSLAQLGKYTGEGESEEAKKELFVKSYSY* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0311 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 398 IPR000741 GO:0004332|GO:0006096
Gso12g0311 398 Gene3D Aldolase class I 36 397 IPR013785 -
Gso12g0311 398 SUPERFAMILY Aldolase 45 398 - -
Gso12g0311 398 CDD FBP_aldolase_I_a 52 378 - -
Gso12g0311 398 Pfam Fructose-bisphosphate aldolase class-I 54 398 IPR000741 GO:0004332|GO:0006096
Gso12g0311 398 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 259 269 IPR029768 -
Gso12g0311 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0311 Gso-Chr12 2734830 2737591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0311 51 398 Miscellaneous Gene Families AT3G52930 56.250 1.41e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0311 K01623 - gmx:100775844 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0311 12 2734830 2737591 Gso11g0950 11 8520873 8523749 GST