Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0950 ATGGCCTCTGCATCAGCATCTCTTCTCAAGTCTTCACTTGTTCTTGACAAGTCTGAGTGGGTGAAGGGACAAACACTTCGCCAACCTTCTGCTGCATCAGTTGTGAGATGCAACCCCACCACCCCATCAGGCCTCACAATCAGAGCTGGTTCCTATGCTGATGAGCTCGTTAAGACCGCGAAAACAGTGGCTTCACCAGGGAGGGGTATTTTGGCCATGGATGAGTCCAATGCTACCTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACTGAAGCTAACCGCCAGGCGTACCGTACCCTCCTTGTGACAGTTCCAGGACTTGGTCAGTACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACAACTGATGGCAGGAAGATTGTTGACGTGCTCCTCGAGCAAAACATTGTTCCCGGTATTAAAGTCGACAAGGGTTTGGTACCCCTTGCTGGTTCCAACGATGAGTCATGGTGCCAAGGTCTTGATGGTCTTGCCTCTCGCTCGGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCAGTTAAGGAAGCAGCCTGGGGTCTGGCTCGCTATGCCGCAATTGCTCAGGACAATGGATTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGGGAGCATGGTATTGACAGAACTTTTGAAGTAGCAAAAAAGGTCTGGGCAGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTTTTTGAGGGTATTCTTCTTAAGCCTAGCATGGTTACACCTGGAGCTGAGTCCAAGGACAAGGCCAGTCCTCAGACAGTTGCTGATTACACCCTCAAGCTCCTTCACAGGAGAATTCCCCCTGCTGTCCCTGGAATTATGTTTTTGTCTGGTGGACAGTCTGAGGTTGAAGCTACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCGTGGCACGTGTCGTTCTCGTATGCCAGAGCCCTCCAAAACACTGCCTTGAAGACATGGGGAGGCCGCCCAGAGAATGTGAAGGCGGCACAAGATGCACTTCTTTTCCGTGCCAAGTCCAACTCGCTCGCCCAGCTTGGGAAGTACACCGGTGAGGGTGAATCTGAGGAAGCCAAGAAGGAGTTGTTCGTCAAAGGCTACTCCTACTAA 1200 0.5142 MASASASLLKSSLVLDKSEWVKGQTLRQPSAASVVRCNPTTPSGLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGQYISGAILFEETLYQSTTDGRKIVDVLLEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIDRTFEVAKKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDKASPQTVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTGEGESEEAKKELFVKGYSY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0950 399 Gene3D Aldolase class I 37 398 IPR013785 -
Gso11g0950 399 Pfam Fructose-bisphosphate aldolase class-I 55 399 IPR000741 GO:0004332|GO:0006096
Gso11g0950 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 399 IPR000741 GO:0004332|GO:0006096
Gso11g0950 399 CDD FBP_aldolase_I_a 53 379 - -
Gso11g0950 399 SUPERFAMILY Aldolase 46 399 - -
Gso11g0950 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 399 - -
Gso11g0950 399 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 260 270 IPR029768 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0950 Gso-Chr11 8520873 8523749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0950 52 399 Miscellaneous Gene Families AT3G52930 55.966 1.13e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0950 K01623 - gmx:100818915 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0311 12 2734830 2737591 Gso11g0950 11 8520873 8523749 GST