Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0308 ATGGGAGCTATTGCTGGAGAAGAGCTTCTGAAATGGGAGAAGATGCAAGGAGTGAGCAGTCGCGAAGAGAAGATTCTGGTGTCAATAAGACTGAGGCCTTTGAATGAGAAGGAAATTGCTGCTAATGAATCAGCAGACTGGGAATGCATTAATGATACTACCATCTTGTACCGGAACACGCTGCGTGAGGGTTCCACATTTCCAAGCGCCTACACATTTGACAGAGTATTTCGGGGTGATTGTGTCACAAGGCAGGTATATGAGGAAGGAGCCAAAGAAGTTGCTCTTTCAGTTGTCAGTGGAATTAACTCAAGTATTTTTGCATATGGGCAAACAAGTAGTGGAAAGACATACACGATGGTTGGAATAACTGAATACGCTGTTGCAGATATTTTTGACTATATAACGAGGCATGAAGAAAGAGCATTTATATTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTAGAGACCTCCTCAGCACGGACAACACTCCACTTAGACTACGTGATGATCCTGAGAAAGGGCCCATTTTAGAGAAACTCACAGAGGAGACTCTACGGGACTGGGAGCATTTAAAAGAGCTTCTAGCCTACAGTGAAGCTCAGAGACAGGTGGGAGAGACATACCTAAATGAAAAGAGTTCTAGATCTCACCAAATTATAAGATTGACAATGGAGAGTTCTGCCAGGGAATTCCTGGGCAAGGGCAACTCAGCGACCCTAGTAGCTAGTGTGAATTTAGTTGATTTGGCAGGGAGTGAGCGCGCATCTCAGGCATCATCAGCTGGGATGAGATTAAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTGGAACAGTTATTCGTAAGCTTAGTAAGGGAAGACATGGACACATCAATTACAGAGACTCCAAGTTGACACGCATACTGCAGCCTTGTTTGGGTGGAAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGTAGCCATGTTGAGCAAACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAGGTGACCACTAAAGCACAGGTTAATGTCGTGATGTCTGATAAGGCGTTGGTCAAGCATTTGCAAAAAGAGGTGGCTAGATTGGAGAGTGAGTTGAAAACTCCTGGTCCTGCTACCTCCAATTGTGATTATGCAGCATTATTGAGAAAGAAAGATCTTCAGATAGAAAAGATGGAGAAGGAGATTAGGGAGCTAACTAAGCAACGTGACCTTGCTCAATCAAGGGTTGAGGATTTGCTTCGCATGGTCGGAAAGGATCAGATATCTGGAAAAGAAGGGGAAGATATCTGGGAAGATGATTGTTCAGTATCAGAGTCATCCAGCATTTGTGGTCCTCATCGTCCTAATACACATATTAGAGAGTTCAACAATCCTCATTATAATGATGGAGACAGTGATCCTGATGACCCTGATGATTATTGCAAAGAAGTTCGATGTGTTGAGAATGGGGAGTTAGCTTTACCAATATCTGGAGACGAAAGTGGAATAAGCCAAGAAATATCTTCACATTTGAATGAAGATACTGGAGACAGTCAGATCCAAGAAAATTCAACATTGCTGGAGCAGAGACTGCATGTTGTACAGTCAACCATTGATTCTCTTGTATGTCCTTCCCCTGATGAACAATCTCCACAGGTCATGTCAGAAAATAATAAGAATCTTAGATTAACTAGAAGCTGGAGTTGTACGGAATATCACATGACTGGTTCTCCCGAGTCAGTAGGGGGAATACAGAGGACTCCAGCCAATGGATATGAAAAAGGATTCCCTGGAAGGCCAGATGGTTTGCAGAAGTTTCCTCCATTAAATTATGATGGTTCCACAAAATTGTTAAGGAATGGTTCTCAGTCTTCCATGGGAAGTCTTTCTGTGGATGATCTTAGAGCCAGCAGCATCAGAACATCTGCTGATGAGGATATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACAAGAATATGAGAAGCATCTTGTTGATGGTCAGGATCAGGAGACAGGAAGAAAGAACGTGAAAGATGTGGGTGTGGATCCGATGTTGGAGGCGCCTAGATCTCCTTTAGATTGGTCTCTGCAATTCAAGAGACAGCAGAAAGAGATAATTGAACTGTGGCAATCTTGCTGTGTACCATTGACCCACAGGACCTACTTCTTTCTTTTGTTTAGGGGTGATCCAACAGACTCCATTTACATGGAGGTAGAACTTAGAAGATTATCCTTCCTCAAAGAATCATTTTCTGATGGAAACCAGTCTGTGAGCGATAGTCAGACAATCACACTAGCTTCAAGCGTGAAAGCTCTTCGGCGAGAAAGAGGAATGCTTGTGAAGCTTATGCAGAGGAGGCTTTCGGAGAAGGAGCGAAGAAGGCTATACGAGGAGTGGGGCATTGCATTGGATTCAAAGCGCAGGAGGGTGCAACTAGGGAACCGTTTATGGAGCGAAAATGATATGAACCACGTAATGCAAAGTGCTACAATAGTTGCCAAGTTAGTGAGGTTTTGGGAAAGAGGCAAGGCCCTCAAGGAGATGTTTGGCCTTAGCTTCACACCCCAACTCACGGGGCGAAGATCATCTTATCCATGGAAAAATAGCTCAACATCTCTTTTATAG 2655 0.4313 MGAIAGEELLKWEKMQGVSSREEKILVSIRLRPLNEKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCVTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYITRHEERAFILKFSAIEIYNEIVRDLLSTDNTPLRLRDDPEKGPILEKLTEETLRDWEHLKELLAYSEAQRQVGETYLNEKSSRSHQIIRLTMESSAREFLGKGNSATLVASVNLVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLSKGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKEVARLESELKTPGPATSNCDYAALLRKKDLQIEKMEKEIRELTKQRDLAQSRVEDLLRMVGKDQISGKEGEDIWEDDCSVSESSSICGPHRPNTHIREFNNPHYNDGDSDPDDPDDYCKEVRCVENGELALPISGDESGISQEISSHLNEDTGDSQIQENSTLLEQRLHVVQSTIDSLVCPSPDEQSPQVMSENNKNLRLTRSWSCTEYHMTGSPESVGGIQRTPANGYEKGFPGRPDGLQKFPPLNYDGSTKLLRNGSQSSMGSLSVDDLRASSIRTSADEDITSIHTFVAGMKEMVKQEYEKHLVDGQDQETGRKNVKDVGVDPMLEAPRSPLDWSLQFKRQQKEIIELWQSCCVPLTHRTYFFLLFRGDPTDSIYMEVELRRLSFLKESFSDGNQSVSDSQTITLASSVKALRRERGMLVKLMQRRLSEKERRRLYEEWGIALDSKRRRVQLGNRLWSENDMNHVMQSATIVAKLVRFWERGKALKEMFGLSFTPQLTGRRSSYPWKNSSTSLL* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0308 884 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0308 884 Coils Coil 355 375 - -
Gso12g0308 884 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0308 884 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0308 884 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0308 884 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0308 884 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0308 884 CDD KISc_CENP_E 24 346 - -
Gso12g0308 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 379 IPR027417 -
Gso12g0308 884 Coils Coil 392 426 - -
Gso12g0308 884 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 884 - -
Gso12g0308 884 Gene3D Kinesin motor domain 15 377 IPR036961 -
Gso12g0308 884 Pfam Domain of unknown function (DUF3490) 707 866 IPR021881 -
Gso12g0308 884 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso12g0308 884 PANTHER CENTROMERE PROTEIN E 6 884 - -
Gso12g0308 884 MobiDBLite consensus disorder prediction 452 481 - -
Gso12g0308 884 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0308 Gso-Chr12 2707291 2714804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0308 22 427 Miscellaneous Gene Families AT5G06670 39.372 1.60e-82 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0308 K11498 - gmx:100820012 1737.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0308 12 2707291 2714804 Gso11g0947 11 8494940 8502611 GST