Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0947 ATGGGAGCTATTGCTGGAGAAGAGCTGCTGAAATGGGAGAAGATGCAAGGAGTGAGTAGTCGCGAAGAGAAGATTCTGGTGTCAATAAGACTGAGGCCTCTGAATGAGAAGGAAATTGCTGCTAATGAATCAGCAGACTGGGAATGCATTAATGATACTACCATCTTGTACCGGAACACACTGCGTGAGGGTTCCACATTTCCAAGCGCCTACACATTTGACAGAGTATTTCGGGGTGATTGTGTCACGAGGCAGGTATATGAGGAAGGAGCCAAAGAAGTTGCTCTTTCAGTTGTCAGTGGAATTAACTCAAGTATTTTTGCATATGGGCAAACAAGTAGTGGAAAGACATACACGATGGTTGGAATAACTGAATACGCTGTTGCAGATATTTTTGACTATATAGAGAGGCATGAAGAAAGAGCATTTATATTGAAGTTCTCAGCAATTGAAATTTACAATGAAGTTGTTAGAGACCTCCTCAGCACTGACAACAACACTCCACTTAGACTACGTGATGATCCTGAGAAAGGGCCCATTTTAGAGAAACTCACAGAGGAGACTCTACGGGACTGGGAGCATTTAAAAGAGCTTCTAGCCTTCAGTGAAGCTCAGAGACAGGTGGGAGAGACATACCTAAATGAAAAGAGTTCTAGATCTCACCAAATCATCAGATTGACAATGGAGAGTTCTGCCAGGGAATTCCTGGGCAAAGGCAACTCAGCCACCCTAATAGCTAGTGTGAATTTAGTTGATTTGGCAGGGAGTGAGCGCGCATCTCAGGCATCATCAGCTGGGATGAGATTAAAAGAAGGTTGTCATATAAACCGGAGCTTACTGACTCTTGGAACAGTTATTCGTAAGCTTAGCAACGGAAGACATGGACACATCAATTACAGAGATTCCAAGTTGACACGCATACTGCAGCCTTGTTTGGGTGGAAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGAAGCCATGTTGAGCAAACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTGACCACTAAAGCACAGGTTAATGTCGTGATGTCTGATAAGGCGCTGGTTAAGCATTTGCAAAAAGAGGTGGCTAGATTGGAGAGTGAGTTGAAAACTCCTGGTCCTGTACCCTCCAATTGTGATTATGCAGCATTGTTGAGAAAGAAAGATGTCCAGATAGAAAAGATGGAGAAGGAGATTAGGGAGCTAACTAAGCAACGTGACCTTGCTCAATCAAGGGTTGAGGATTTGCTTCGCATGGTTGGAAAGGAGCAGATATCTGGAAAAGAAGGGGAAGATATCTGGGAAGATGACTGTTCAGTATCAGAGTCATCAAGCATTTGTGGTCCTCATCGTCCTAATACACACATTAGAGAGTTCAACAATCCTCATTATAATGATGAAGACAGTGATCCTGATGACGACCCTGATGATTATTGCAAAGAAGTTCGATGTGTTGAGAATGGGGAGTTAGCTTTACCAATATCTGGAGAGGAAAGTGGAACAAGCCAAGAAATATCTTCACATTTGAATGAAGATACCGGAGACAGTCAGATCCAAGAAAATTCAACATTGCTGGAGCAGAGATTGCATGTTGTACAGTCAACCATTGATTCTCTTGTATGTCCTTCCCCTGATGAACACTCTCCACAGGTCATGTCAGAAAATAATAAGAATCTTAGATTAACTAGAAGCTGGAGTTGTACGGAACATCACATGGCTGGTTCTCCCAAGTCAGGCGGAGGAGTACAGAGGACTCCAGCCAATGGATATGAAAAAGGATTCCCTGGAAGACCAGATGGTTTGCAGAGAAAGTTTCCTCCATTAAATTATGATGGTTCAACAAGATTGTTAAGGAATGGTTCTCAGTCTTCCATGGGAAGTCTTTCTGTGGATGATCTTAGAGCCAGCAGCATCAGAACATCTGCTGATGAGGATATTACTAGCATCCAGACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACAAGAATATGAGAAACAGCTTGTTGATGGTCAGGATCAGGAGACAGGAAGAAAGAACGTGAAAGATGTAGGTGTGGATCCGATGTTGGAGGCACCTGGAGGAACTCCATTAGATTGGTCTCTGCAATTCAAGAGACATCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTGTGTACCATTGACCCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCCATCAGACTCCATTTACATGGAGGTAGAACTTAGAAGATTGTCCTTCCTCAAAGAATCATTTTCTGATGGAAACAAGTCTGTGAGAGATAGTCAGACAATCACACTAGCTTCAAGCGTGAAAGCACTTCGGCGAGAAAGAGGAATGCTTGTGAAGCTTATGCAGAGGAGGCTTTCCGAGAAGGAGAGAAGAAGGCTATACGAGGAGTGTGGCATTGCATTGGATTCAAAGCGCAGGAGGGTACAACTAGCGAACAGTTTATGGAGCGAAAATGATATGAACCACGTAATGCAAAGTGCTACAATAGTTGCCAAGTTAGTGAGGTTTTGGGAACGAGGCAAGGCCCTCAAGGAGATGTTTGGCCTTAGCTTCACACCCCAACTCACAGGGCGAAGATCCTCTTATCCATGGAAAAATAGCTCAGCATCTCTTTTATAG 2667 0.4331 MGAIAGEELLKWEKMQGVSSREEKILVSIRLRPLNEKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCVTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYIERHEERAFILKFSAIEIYNEVVRDLLSTDNNTPLRLRDDPEKGPILEKLTEETLRDWEHLKELLAFSEAQRQVGETYLNEKSSRSHQIIRLTMESSAREFLGKGNSATLIASVNLVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLSNGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKEVARLESELKTPGPVPSNCDYAALLRKKDVQIEKMEKEIRELTKQRDLAQSRVEDLLRMVGKEQISGKEGEDIWEDDCSVSESSSICGPHRPNTHIREFNNPHYNDEDSDPDDDPDDYCKEVRCVENGELALPISGEESGTSQEISSHLNEDTGDSQIQENSTLLEQRLHVVQSTIDSLVCPSPDEHSPQVMSENNKNLRLTRSWSCTEHHMAGSPKSGGGVQRTPANGYEKGFPGRPDGLQRKFPPLNYDGSTRLLRNGSQSSMGSLSVDDLRASSIRTSADEDITSIQTFVAGMKEMVKQEYEKQLVDGQDQETGRKNVKDVGVDPMLEAPGGTPLDWSLQFKRHQKEIIELWQSCCVPLTHRTYFFLLFRGDPSDSIYMEVELRRLSFLKESFSDGNKSVRDSQTITLASSVKALRRERGMLVKLMQRRLSEKERRRLYEECGIALDSKRRRVQLANSLWSENDMNHVMQSATIVAKLVRFWERGKALKEMFGLSFTPQLTGRRSSYPWKNSSASLL* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0947 888 Pfam Domain of unknown function (DUF3490) 711 870 IPR021881 -
Gso11g0947 888 ProSitePatterns Kinesin motor domain signature. 246 257 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso11g0947 888 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 888 - -
Gso11g0947 888 Coils Coil 393 427 - -
Gso11g0947 888 Pfam Kinesin motor domain 30 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0947 888 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0947 888 PRINTS Kinesin heavy chain signature 211 228 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0947 888 PRINTS Kinesin heavy chain signature 247 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0947 888 PRINTS Kinesin heavy chain signature 297 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0947 888 Gene3D Kinesin motor domain 15 378 IPR036961 -
Gso11g0947 888 ProSiteProfiles Kinesin motor domain profile. 24 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0947 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 379 IPR027417 -
Gso11g0947 888 MobiDBLite consensus disorder prediction 498 525 - -
Gso11g0947 888 MobiDBLite consensus disorder prediction 504 525 - -
Gso11g0947 888 CDD KISc_CENP_E 24 347 - -
Gso11g0947 888 SMART kinesin_4 22 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0947 888 PANTHER CENTROMERE PROTEIN E 6 888 - -
Gso11g0947 888 Coils Coil 356 376 - -
Gso11g0947 888 MobiDBLite consensus disorder prediction 450 485 - -
Gso11g0947 888 MobiDBLite consensus disorder prediction 578 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0947 Gso-Chr11 8494940 8502611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0947 22 428 Miscellaneous Gene Families AT5G06670 39.857 9.86e-82 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0947 K11498 - gmx:100788096 1740.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0308 12 2707291 2714804 Gso11g0947 11 8494940 8502611 GST