Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0263 ATGGGTCGCCTTCTTCTCTTTCTCATTATTCCCAGCCTTGTCGCATTGTCTTTCCTCTCAGAGGTACAATCAGCGTCGTTCAAGATTGTGAACAAGTGCCGCCACACGATATGGCCGGGATTACTCTCCGGTGCCACCTCGCCGCCGCTTCCCACCACCGGATTCACCCTCGAGAGCGGCAAATCGAGGACCATAAAAATTCCAAAGTCTTGGTCGGGTCGGATATGGGCACGGACACTCTGCGGTCAAGACTCTGACGGAAAGTTCTCCTGCGCCACCGCCGATTGCGGCTCCGGGAAAGTAGAGTGCGTCGGCGGAGCCAAACCGCCGGCGACATTGGCGGAGTTCACTCTCAACGGCGCCGACGGTTTGGACTTCTACGACGTGAGTTTGGTCGACGGTTACAACCTTCCGATGCTGATCGTCGCCAAGGACGGCATCAGGGGAGGGTGCAGCGCCACCGGTTGCCTCGTCGACCTCAACGGCGGGTGTCCAGCGGAGCTGAGGGTGGCGCGATCAAACGGCAGCCGCGGGAGCGTGGCGTGCCGGAGCGCGTGCGAGGCCTTCGGGGATCCTCGTTTTTGCTGCAGTGAAGCGTACTCGACGCCTGACACGTGTGGCCCTTCTCCTTATTCACTGTTCTTCAAGCACGCTTGTCCACGCGCGTATAGCTACGCGTATGATGACAAGACCAGCACCTACACATGTGCCAACGCTAACTATTTGATCATTTTCTGCCCCTTCCCCTATACCAGCCAAAAACTGTTGGGAGCACGAAAAGATGGGGCACAGCTTCCTCTGGTAAATAAAACTATGATGTACTTATCAAGGCTACAATCAGGTGGTTCCTCACCATCAGGGTAG 864 0.5671 MGRLLLFLIIPSLVALSFLSEVQSASFKIVNKCRHTIWPGLLSGATSPPLPTTGFTLESGKSRTIKIPKSWSGRIWARTLCGQDSDGKFSCATADCGSGKVECVGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKDGIRGGCSATGCLVDLNGGCPAELRVARSNGSRGSVACRSACEAFGDPRFCCSEAYSTPDTCGPSPYSLFFKHACPRAYSYAYDDKTSTYTCANANYLIIFCPFPYTSQKLLGARKDGAQLPLVNKTMMYLSRLQSGGSSPSG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0263 287 Pfam Thaumatin family 31 247 IPR001938 -
Gso12g0263 287 CDD TLP-PA 26 246 - -
Gso12g0263 287 Gene3D Thaumatin 25 247 IPR037176 -
Gso12g0263 287 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 8 258 - -
Gso12g0263 287 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Gso12g0263 287 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Gso12g0263 287 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Gso12g0263 287 SMART tha2 27 247 IPR001938 -
Gso12g0263 287 PIRSF PR5 1 280 IPR001938 -
Gso12g0263 287 PANTHER OS03G0233200 PROTEIN 8 258 IPR001938 -
Gso12g0263 287 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Gso12g0263 287 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Gso12g0263 287 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Gso12g0263 287 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Gso12g0263 287 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0263 Gso-Chr12 2341796 2345222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0263 5 247 Receptor kinase-like Gene Family AT5G38280 52.439 5.52e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0263 - - gmx:100802252 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0263 12 2341796 2345222 Gso11g0904 11 8112821 8115863 GST