Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0259 ATGGGTTCCGAGGTCTCCAAACAGGTTGAGAGACGAAAGGCGATCCACACAGAGGGAAAAACTCTGTCTGATCTTAGAAACTCTGGGGAAGATTACCCTGGCTCAGATTATCATCCCTCAGACAGAAAAAAATGGATGTCTGAGCTCAACCCTGAGAAAGTTGTGATAAAACAAATTGTTTGGCCTGGAACCCATGATTCTGCAACCAACAAGATTGGCATCCCATGCATCACTCGGCCTTTTGCTCAATGCCAATCCTTGTCCATCTACCAGCAGCTTGTGTTGGGGACAAGGGTGATTGACATTCGGGTGCAGGAGGATCGTAAAGTGTGCCACGGAGTCCTCGTTACATACAGCATCGACGTTGTCATCAAAGATCTCAAGAAGTTCTTATCAGAAACTCAGTCCGAGATCATCATCCTCGAGGTTAGAACCGAGTTTGGGCACGAGGACCCTCAGGAATTCGACAAGTACCTTGAGGAACAACTGGGGGATTACCTAGTTCCCCAGGATGATAAGGTTTTTGAAAAGACAATCGCAGAGGTGCTACCAAAGAGAGTTATATGTGTTTGGAAGCCAAGAAAATCGCCACAGCCTAAGGCAGGGAGTCCTCTGTGGAGTGCAGGGTACTTGAGGGATAACTGGATCAACACTGATTTGCCATCAACCAAGTTTGAGAGCAACATGAAGCATTTGAGTGAGCAGCAACCTGTTACGTCCAGAAAATACTTCTACAGGGTGGAGAATACCGTTACGCCTGTGGCGGATAACCCCGTTCTGTGTGTGAAGCCTGTCACTGAGCGCATTCATGGCTTTGCAAGGCTCTTCATTAGTCAGTGCTTCTCCAAAGGGTATGCAGATAGACTGCAGATTTTTTCTACGGATTTCATTGACCAGGATTTCGTTGATGCATGCGTTGGACTCACACGTGCCAGGGTTGAGGGTAGAGCCTGA 954 0.4759 MGSEVSKQVERRKAIHTEGKTLSDLRNSGEDYPGSDYHPSDRKKWMSELNPEKVVIKQIVWPGTHDSATNKIGIPCITRPFAQCQSLSIYQQLVLGTRVIDIRVQEDRKVCHGVLVTYSIDVVIKDLKKFLSETQSEIIILEVRTEFGHEDPQEFDKYLEEQLGDYLVPQDDKVFEKTIAEVLPKRVICVWKPRKSPQPKAGSPLWSAGYLRDNWINTDLPSTKFESNMKHLSEQQPVTSRKYFYRVENTVTPVADNPVLCVKPVTERIHGFARLFISQCFSKGYADRLQIFSTDFIDQDFVDACVGLTRARVEGRA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0259 317 MobiDBLite consensus disorder prediction 1 25 - -
Gso12g0259 317 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 7 314 - -
Gso12g0259 317 SMART plcx_3 50 191 IPR000909 -
Gso12g0259 317 Pfam Phosphatidylinositol-specific phospholipase C, X domain 80 174 IPR000909 -
Gso12g0259 317 MobiDBLite consensus disorder prediction 1 43 - -
Gso12g0259 317 SUPERFAMILY PLC-like phosphodiesterases 41 308 IPR017946 GO:0006629|GO:0008081
Gso12g0259 317 PANTHER UNCHARACTERIZED 7 314 - -
Gso12g0259 317 CDD PI-PLCXDc_plant 32 312 - -
Gso12g0259 317 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 184 - -
Gso12g0259 317 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 309 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0259 Gso-Chr12 2293961 2295782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0259 1 317 Acyl Lipid Metabolism Gene Families AT4G38690 74.528 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0259 - - gmx:100789013 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0259 12 2293961 2295782 Gso11g0900 11 8064063 8065293 GST