Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0900 ATGATTCTGCAACCAATAAGATTGGCATCCCATGCATCACTCGGCCTTTTGCTCAATGACAATCCTTGTCCATCTACCAGCAGCTTGTGTTGGGGACAAAGGGTGATTGACATTCGGGTGCAGGAGGATCGCAAAGTGTGCCACGGAGTCCTCGTTACATACAGCATCGATGTTGTCATCAAAGATGTCAAGAAGTTCTTATCAGAAACTCAGTCCGAGATCATCATCCTCGAGGTTAGAACCGAGTTTGGGCACGAGGATCCTCCGGAATTCAACAAGTACCTTGAGGAACAACTGGGGGATTACCTAGTTCCCCATGATGAAAATGTTTTTGAAAAGACCATCGCAGAAGTGCTACCAAAGAGAGTTATATGTGTTTGGAAGCCAATAAAATCACCACAGCCTAAGACAGGGAGTCCTCTGTGGAGTGCAGGGTACTTGAGGGATAATTGGATCAACACTGATTTGCCATCAACCAAGTTTGAGAGCAACATGAAGCATTTGAGTGAGCAGCAACCTGTTACTTCCAGAAAATACTTTTACAGGGTGGAGAACATCGTTACGCCTGTGGCGGATAACCCTGTTCTGTGTGTGAAGCCTGTCACTGAGCGAACTCATGGCTTTGCAAGACTCTTCATGAGTCAGTGCTTCTCCAAAGGGTATGCAGATAGACTGCAGATTTTTTCTACGGATTTCATTGACCAGGATTTCGTTGATGCATGTGTTGGACTCACATGTGCCAGGGTTGAGGGTAGAGCCTGA 762 0.4619 MILQPIRLASHASLGLLLNDNPCPSTSSLCWGQRVIDIRVQEDRKVCHGVLVTYSIDVVIKDVKKFLSETQSEIIILEVRTEFGHEDPPEFNKYLEEQLGDYLVPHDENVFEKTIAEVLPKRVICVWKPIKSPQPKTGSPLWSAGYLRDNWINTDLPSTKFESNMKHLSEQQPVTSRKYFYRVENIVTPVADNPVLCVKPVTERTHGFARLFMSQCFSKGYADRLQIFSTDFIDQDFVDACVGLTCARVEGRA* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0900 253 Pfam Phosphatidylinositol-specific phospholipase C, X domain 28 110 IPR000909 -
Gso11g0900 253 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 23 250 - -
Gso11g0900 253 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 29 120 - -
Gso11g0900 253 PANTHER UNCHARACTERIZED 23 250 - -
Gso11g0900 253 SUPERFAMILY PLC-like phosphodiesterases 24 244 IPR017946 GO:0006629|GO:0008081
Gso11g0900 253 Gene3D Phosphatidylinositol (PI) phosphodiesterase 24 245 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0900 Gso-Chr11 8064063 8065293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0900 27 253 Acyl Lipid Metabolism Gene Families AT4G38690 72.687 3.95e-128 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0900 - - gsj:114376954 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0259 12 2293961 2295782 Gso11g0900 11 8064063 8065293 GST