Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0252 ATGGCAGCACAGTCAAACGCTGGATTTCACAATGAAGATATAGATTCTATTTTGAACAGGCATGCAATATCATTTCAACCTGGTGGTGCTATTAACCGTTTGTCTGAGATGGTTCCAATGGGAAATTATTTTGGGCTAAGTAGTTCGTCTGGGATGATATATTCTGGGAATTCAAGCATCATTAACAGTAATCCTGTCATGAGTCAAGCTGGTAATCCATCCAGTTCTTCGCTTCTTCTCGATTCGGTCCCGGGGCTGAAGCACGACACAGGGTTGGCTGTTGAGTGGTCTGTTGATGAACAGTACAGATTGGAGGAGGGCCTTGCCAGATATGCTGATGAGCCAAGTATCATGAGGTATATCAAAATTGCTGCCCTGTTGCCTGATAAAACTGTTCGTGATGTTGCTTTGAGGTGTAGATGGTTGACAAGAAAGCGGAGGAAATCAGAAGAACACAATCTGGGAAAAAAGGTCAACAATAGAAAGGATAAGCCAGTGGAATTAGCTTCAAAGACAAATTTACATTCAGCTCTGCCCTCAAGCATGGCTACGTATTCTCGCATTTCACACCATATGGACCAAAGGCAACGGATACAATATGATGGTATATGTAGCCCTTTGAAGCAACTCATGGAGCAGAATGCTCAAGCTTTTAATCAAATCACTGCCAATTTGTCTACTTACAAGTTGCAGGATAACATCGACCTCTTTTGCCACACAAGGCACAATATTAATACCATTCTTAATAATATGAGTGAGATGCCTGGCATTATGAGCCAAATGCCGCCACTGCAAGTTAACATTAACGAAGATCTTGCAAGTAGTATTTTGCTTAATAGAACATAG 846 0.4161 MAAQSNAGFHNEDIDSILNRHAISFQPGGAINRLSEMVPMGNYFGLSSSSGMIYSGNSSIINSNPVMSQAGNPSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEGLARYADEPSIMRYIKIAALLPDKTVRDVALRCRWLTRKRRKSEEHNLGKKVNNRKDKPVELASKTNLHSALPSSMATYSRISHHMDQRQRIQYDGICSPLKQLMEQNAQAFNQITANLSTYKLQDNIDLFCHTRHNINTILNNMSEMPGIMSQMPPLQVNINEDLASSILLNRT* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0252 281 CDD SANT 95 140 IPR001005 -
Gso12g0252 281 Gene3D - 92 154 - -
Gso12g0252 281 Pfam Protein of unknown function (DUF3755) 227 260 IPR022228 -
Gso12g0252 281 PANTHER TRANSCRIPTION FACTOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED 1 281 - -
Gso12g0252 281 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 1 281 - -
Gso12g0252 281 SUPERFAMILY Homeodomain-like 84 151 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0252 Gso-Chr12 2238032 2244378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0252 - - gmx:100807371 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0252 12 2238032 2244378 Gso11g0893 11 7997156 8003369 GST