Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0893 ATGGCAGCACAGTCAAACGCTGGATTTCACAATGAAGATATAGATTCTGTTTTGAACAGGCGTGCAATATCATTTCAACCTGGTGGTGGTGCTATTAACCGCTTGTCCGAGATGGTTCCTATGGGTAATTATTTTGGGCTAAGTAGTTCGTCTGAGATGATGATATATTCTGGGAATTCAAGCATCATTAACAGTAGTAATCCTGTCATGGGTCAAATGAGTCAAGCTGGTAATCTATCCAGTTCCTCGCTTCTTCTCGATTCGGTCCCGGGGCTGAAGCACGACACAGGGTTGGCTGTTGAGTGGTCTGTTGATGAACAGTACAGATTGGAAGAAGGCCTTGCCAAATATGCTGATGAGCCAAGTATCATGAGGTATATCAAAATTGCTGCCCTGTTGCCAGATAAAACTGTTCGTGATGTTGCTTTGAGGTGTAGATGGTTGACAAGAAAGCGAAGAAAATCAGAAGAACACAATCTGGGGAAAAAGGTCAATAATAGAAAGGATAAGCCAGTGGAATTAGCTTCAAAGACGAATTTACATTCAGCTCTGCCCTCAAGCATGGCTACATATCCTCGCATGTCACACCATATGGACCAAAGTCAACAGATACAATATGATGGTATTTGTAGCCCTTTGAAGCAACTCATGGAGCAGAATGCTCAAGCTTTCAATCAAATCACTGCCAATTTGTCTACTTACAAGTTGCAGGATAATATCGACCTCTTCTGCCACACAAGGCACAATATTAATACCATTCTTAATAATATGAGTGAGATGCCTGGCATTATGAGCCAAATGCCGCCACTGCAAGTTACCATTAACGAGGATCTTGCAAGTAGTATTCTGCCTAATAGAACATAG 864 0.4201 MAAQSNAGFHNEDIDSVLNRRAISFQPGGGAINRLSEMVPMGNYFGLSSSSEMMIYSGNSSIINSSNPVMGQMSQAGNLSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEGLAKYADEPSIMRYIKIAALLPDKTVRDVALRCRWLTRKRRKSEEHNLGKKVNNRKDKPVELASKTNLHSALPSSMATYPRMSHHMDQSQQIQYDGICSPLKQLMEQNAQAFNQITANLSTYKLQDNIDLFCHTRHNINTILNNMSEMPGIMSQMPPLQVTINEDLASSILPNRT* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0893 287 Pfam Protein of unknown function (DUF3755) 233 266 IPR022228 -
Gso11g0893 287 CDD SANT 101 146 IPR001005 -
Gso11g0893 287 PANTHER TRANSCRIPTION FACTOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED 1 287 - -
Gso11g0893 287 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 1 287 - -
Gso11g0893 287 SUPERFAMILY Homeodomain-like 90 157 IPR009057 -
Gso11g0893 287 Gene3D - 98 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0893 Gso-Chr11 7997156 8003369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0893 - - gmx:100797061 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0252 12 2238032 2244378 Gso11g0893 11 7997156 8003369 GST