Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0240 ATGTCAGATCTTGAGGCTCCCTTGCGCCCTAAGAGGAAGAAGGTTTGGGTGGACTATTTCGTTCAGTTTCGATGGATCCTTGTTATTTTTGTGGTCCTTCCCATCTCCTTCACCATTTATTTCCTTACATACCTTGGGGATGTAAGATCTGAGTGGAAGTCCTATAAGACGCGTCAGAAGGAACATGATGAGAATGTGAAGAAGGTTATCAAACGTCTCAAACAGAGGAATCCATCAAAAGATGGTCTTGTCTGTACCGCTCGTAAGCCCTGGATTGCTGTTGGGATGCGGAACGTTGACTATAAGAGAGCCCGTCATTTTGAAGTTGATTTGTCTGCTTTCCGGAATGTACTTGAGATCGACAAAGAACGGATGATTGCAAGAGTTGAGCCCCTAGTCAACATGGGTAAGATCAGCAGGGTGACTGTACCCATGAATCTTTCCCTTGCTGTAGTTGCAGAGCTTGATGATCTAACTGTCGGTGGTCTCATTAACGGCTATGGTATAGAAGGAAGCTCCCACAAATATGGTTTGTTCGCTGATACTGTTGTGGCCTATGAAATTATTTTGGCTGATGGCACTCTTGTGAGAGCCACCAAGGACAATGAGTACTCTGATCTATACTATGCCATTCCGTGGTCTCAGGGAACACTCGGCCTTCTTGTTGCTGCTGAGATCAGGCTTATACCCGTTAAGGAGTACATGAAGCTAACCTATAAACCTGTTGTTGGCACCCTGCAAGATCTTGCTCAGGCATATTGTGATTCTTTTGCTCCCAGAGATGGAGACCAGGATAATGAGGAGAAGGTTCCAGACTTTGTTGAAGGAATGATTTATACACCAACAGAAGGTGTGATGATGACAGGAAGATATGCTTCAAAGGAAGAGGCCAAGAAGAAGGGGAATAAGATCAACAGTGTAGGATGGTGGTTTAAACCCTGGTTCTATCAGCATGCACAGACGGCACTGAAGAAAGGAGAGTTTGTAGAATACATTCCTACCAGAGAATATTATCACAGGCACACGAGATGCTTGTACTGGGAGGGAAAGCTTATCCTCCCATTTGCTGATCAATTTTGGTTTAGGTATCTGTTTGGCTGGTTGATGCCACCCAAGGTTTCTCTCCTCAAGGCAACTCAAGGTGATGCTATAAGAAACTATTACCATGAAATGCATGTCATCCAGGACATGCTTGTTCCTTTGTACAAGGTGGGAGATGCTTTAGAATGGGTTCACCGTGAGATGGAGGTATACCCCATTTGGCTCTGCCCACACAAATTGTTCAAGCTGCCTGTCAAAACTATGATTTACCCCGAGCCAGGATTCGAACTACACCGCAGGCAAGGAGACACCCAAACTGCTCAAATGTACACAGATGTTGGAGTTTATTATGCACCAGGTCCTGTTCTTAGGGGTGAGGTATTTGATGGGGCAGAAGCAGTGCGTAAAATGGAGAACTGGTTGATTGAAAATCATGGTTTTCAGCCACAGTATGCTGTGTCAGAGCTGTCCGAGAAAAACTTCTGGAGGATGTTTGATGCTGGTTTATATGAGCATACTAGGAGGAAGTATGGAGCTGTTGGGACCTTTATGAGTGTATACTACAAATCAAAGAAGGGCAGGAAAACTGAGAAGGAGGTACAAGAAGCAGAGCAAGCGCACCTTGAAACTGCATATGCAGAAGTTGATCAACCAGTAGACTGA 1704 0.4484 MSDLEAPLRPKRKKVWVDYFVQFRWILVIFVVLPISFTIYFLTYLGDVRSEWKSYKTRQKEHDENVKKVIKRLKQRNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNVLEIDKERMIARVEPLVNMGKISRVTVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHKYGLFADTVVAYEIILADGTLVRATKDNEYSDLYYAIPWSQGTLGLLVAAEIRLIPVKEYMKLTYKPVVGTLQDLAQAYCDSFAPRDGDQDNEEKVPDFVEGMIYTPTEGVMMTGRYASKEEAKKKGNKINSVGWWFKPWFYQHAQTALKKGEFVEYIPTREYYHRHTRCLYWEGKLILPFADQFWFRYLFGWLMPPKVSLLKATQGDAIRNYYHEMHVIQDMLVPLYKVGDALEWVHREMEVYPIWLCPHKLFKLPVKTMIYPEPGFELHRRQGDTQTAQMYTDVGVYYAPGPVLRGEVFDGAEAVRKMENWLIENHGFQPQYAVSELSEKNFWRMFDAGLYEHTRRKYGAVGTFMSVYYKSKKGRKTEKEVQEAEQAHLETAYAEVDQPVD* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0240 567 SUPERFAMILY FAD-binding/transporter-associated domain-like 106 231 IPR036318 GO:0050660
Gso12g0240 567 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 231 IPR016166 GO:0071949
Gso12g0240 567 Gene3D - 118 272 IPR016169 -
Gso12g0240 567 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, BULB-TYPE LECTIN DOMAIN, FAD-BINDING, TYPE 2-RELATED 1 564 - -
Gso12g0240 567 PANTHER 24-DEHYDROCHOLESTEROL REDUCTASE 1 564 IPR040165 -
Gso12g0240 567 Pfam FAD binding domain 109 198 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0240 Gso-Chr12 2124073 2127463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0240 K09828 - gmx:100814521 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0240 12 2124073 2127463 Gso11g0880 11 7898733 7902375 GST