Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0880 ATGTCAGATCTCGAGGCTCCCTTGCGCCCTAAGAGGAAGAAGGTTTGGGTGGACTATTTTGTTCAGTTTCGATGGATCCTTGTTATTTTTGTGGTCCTTCCCATCTCCTTCACCATTTATTTCCTTACATACCTTGGGGATGTAAGATCCGAGTGGAAGTCCTATAAGACGCGTCAGAAGGAACATGATGAGAATGTGAAGAAGGTTATCAAACGTCTCAAACAGAGGAATCCATCAAAAGATGGTCTTGTCTGTACTGCTCGTAAGCCCTGGATTGCTGTTGGGATGCGAAATGTTGACTATAAGAGAGCCCGTCATTTCGAAGTTGATTTGTCTGCTTTCCGGAATGTACTTGAGATCGACAAAGAACGGATGATTGCAAGAGTTGAGCCCCTAGTCAACATGGGTCAGATCAGCAGGGTGACTGTACCCATGAATCTTGCCCTTGCTGTAGTTGCAGAGCTTGATGATCTAACTGTTGGTGGTCTCATTAACGGCTATGGTATAGAAGGAAGCTCCCACAAATATGGCTTGTTCGCTGATACTGTTGTGGCCTATGAAATTATTTTGGCTGATGGCACTCTTGTTAGAGCCACCAAGGACAACGAGTACACTGATCTATACTATGCCATTCCGTGGTCTCAGGGAACCCTTGGCCTTCTTGTTGCTGCTGAGATCAAGCTTATACCTGTTAAGGAGTACATGAAGCTAGCCTACAAACCTGTTGTTGGCACCCTGCAAGATCTTGCACAGGCATATTGTGATTCTTTTGCTCCCAGAGATGGAGACCAGGATAACGAGGAGAAGGTTCCAGACTTTGTTGAAGGAATGATTTATACACCAACAGAAGGTGTGATGATGACAGGAAGATATGCTTCAAAGGAAGAGGCCAAGAAGAAGGGGAATAAGATCAATAGTGTAGGATGGTGGTTTAAACCATGGTTCTATCAGCATGCACAGACGGCACTGAAGAAAGGAGAGTTTGTAGAATACATTCCTACCAGAGAATATTATCACAGGCACACAAGATGCTTGTACTGGGAGGGAAAGCTTATCCTCCCATTTGCTGATCAATTTTGGTTTAGGTATCTGTTTGGCTGGTTGATGCCACCCAAGGTTTCTCTCCTCAAGGCAACTCAAGGTGATGCTATAAGAAACTATTACCATGAAATGCATGTCATCCAGGACATGCTTGTTCCTTTGTACAAGGTGGGAGAGGCTTTAGAATGGGTTCACCGTGAGATGGAGGTATACCCCATTTGGCTCTGCCCACACAAATTGTTCAAGCTGCCTGTCAAAACTATGATTTACCCAGAGCCAGGGTTCGAACTACATCGCAGGCAAGGAGACACCCAAACTGCTCAAATGTACACAGATGTTGGAGTTTACTATGCACCAGGTCCTGTTTTTAGGGGTGAGGTATTTGATGGGGCAGAAGCAGTGCGTAAAATGGAGAACTGGTTGATTGAAAATCATGGTTTTCAGCCACAGTATGCTGTGTCTGAGCTGTCTGAGAAAAACTTCTGGAGGATGTTTGATGCTGGTTTGTATGAGCATACTAGGAGGAAGTATGGAGCTGTTGGGACCTTTATGAGTGTATACTACAAATCAAAGAAGGGCAGGAAAACTGAGAAGGAGGTACAAGAAGCAGAGCAAGCGCACCTTGAAACTGCATACGCAGAAGCTGATCAACCAGTAGACTGA 1704 0.4489 MSDLEAPLRPKRKKVWVDYFVQFRWILVIFVVLPISFTIYFLTYLGDVRSEWKSYKTRQKEHDENVKKVIKRLKQRNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNVLEIDKERMIARVEPLVNMGQISRVTVPMNLALAVVAELDDLTVGGLINGYGIEGSSHKYGLFADTVVAYEIILADGTLVRATKDNEYTDLYYAIPWSQGTLGLLVAAEIKLIPVKEYMKLAYKPVVGTLQDLAQAYCDSFAPRDGDQDNEEKVPDFVEGMIYTPTEGVMMTGRYASKEEAKKKGNKINSVGWWFKPWFYQHAQTALKKGEFVEYIPTREYYHRHTRCLYWEGKLILPFADQFWFRYLFGWLMPPKVSLLKATQGDAIRNYYHEMHVIQDMLVPLYKVGEALEWVHREMEVYPIWLCPHKLFKLPVKTMIYPEPGFELHRRQGDTQTAQMYTDVGVYYAPGPVFRGEVFDGAEAVRKMENWLIENHGFQPQYAVSELSEKNFWRMFDAGLYEHTRRKYGAVGTFMSVYYKSKKGRKTEKEVQEAEQAHLETAYAEADQPVD* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0880 567 Gene3D - 110 231 IPR016169 -
Gso11g0880 567 Pfam FAD binding domain 109 198 IPR006094 GO:0050660
Gso11g0880 567 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 231 IPR016166 GO:0071949
Gso11g0880 567 PANTHER 24-DEHYDROCHOLESTEROL REDUCTASE 1 564 IPR040165 -
Gso11g0880 567 MobiDBLite consensus disorder prediction 545 567 - -
Gso11g0880 567 SUPERFAMILY FAD-binding/transporter-associated domain-like 106 231 IPR036318 GO:0050660
Gso11g0880 567 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, BULB-TYPE LECTIN DOMAIN, FAD-BINDING, TYPE 2-RELATED 1 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0880 Gso-Chr11 7898733 7902375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0880 K09828 - gmx:100791799 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0240 12 2124073 2127463 Gso11g0880 11 7898733 7902375 GST