Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0225 ATGGCTCCCGGGCGTCGACGCGGAGCGAACAAGGCGAAGGCCAATGGCCACTTGAGTTTGGGCGATCTTGTGCTCGCTAAGGTCAAGGGCTTCCCCGCTTGGCCTGCTAAGATAAGCAGGCCTGAAGATTGGGAGAAAGTCCCTGATCCGAAGAAATATTTTGTTCAATTCTTTGGTACAAAAGAAATAGCTTTTGTTGCCCCAGCAGATATTCAGGCATTTACCGGTGAGGCTAAAAATAAGTTGTCTGCTCGTCTTCAAGGCAAGACAAAGTACTTTGCCCAAGCTGTGAAGGAAATATCTGCAGCATTTGATGTGATGCAGAAACAGAAGGCTAGTGGTTTGGCAGATGACACCGATGATTCTCATATTGGTTCAGAGGCTCCTTCTAATGATGGGGTAGTAGGTAACCAAAAGGATGCTGCTGATGCTGTGGTATCAAATATAGAAAAAAATAATATTGATATGGATAATGTTTGCTCTAATTTGGAGCACTATACACAGAGAATAGGAGAAAATGACAGCCAAGATGAAAAGCTCTCTGTATCTAACCATCCAAATGAAAGTTCTTCTGTTTCATCACCCATGATAAAAAACAAATTAGCCATTGGTTCAGAGACAAAGAAGAATGCTAACAAATCTAGTTTTAAAGGTGCTAGTAATGTTAATGATTTTGGCCAAGATGATAATGGGCATAGTGATTTAACCAATGGAACTAAGCCAAGAAAGCTTGATAATGGCTCAAGGAAAAAAAGTGAAGCTGCAGGTGGTAGTAATAGAAATGGTGGATCATCTACTGGAAAATTTATGAAGGAGGGAAATTGTACTGGCCGTGGTGATCTTTCTAGGTCTGGAGAGACATTGAAAGCTGGGAAGAAAAGGAAAAATACATTTTCTGTTAAATTAGATTCTCCGGATACTCTTAAATCAAGCGATAATGGTACTACTGGGGAAAAAGATAGCAACCTGATGAAAGTGAAAACAAGTCATGAGGTAAAAAATGAGCTGCAGGAGATCTCATTTGATTCTGAGGATGCTGATGGTAAAAGTTCTAGTATGAGGAAGAAGACCCAACTTCATGCAAAGCATAATGTAGGAGGAGCAAATGAATCTTTACATGCTACCAAGAAGTTGAAGCGTATGGATGCCAAAGATGATTCAACTTTAGGGTATACTTCAAAGGTTCTGAAAAGAGCTTCGCCTGGCTCTACTGTTATTGAAGACAAACCATTTAAAAAATTAGAATCTAAGAAGTCTACACCAAATTTGAAAACAGAAAAAAGCTTGCCATCAAGGAGTCAAACTGGGGGTGCAGGTTCTGATGATTTTGTCCATGAGTTGCTACCTGGAACTAAACATCATAGCCAGGTTCAGCAAATTATGCCTGATTCTGCCGGCATTGCTTCTGATGAAAAGAACGAAAGAAGTTCTCTTAGACCAAAAGGTGATACAAATAATGTTGTGATAAAACAACTAGAGAGGAAACGTAGAGCTGTTTGCCTTTTTGATGACGATGACGACGATGAACCTAAAACTCCTGTTCACGGAGGAGCTGCAAAAAATATGAAATCGTCTTCTGTTTCAGAGTTCAAGAAGAGCAACAATGTACACTCAGAGAAGTCTGATGTTGTTCAGATGGCTCAAAAAAATTCTAGTGAACTTGAGGACACCCATCTGAAAGAGCCATCTTCTCAATTACATGATGACCATTTGTCTATTCAGCAGCCCCTAAAAGAGAAAGATGACGAAGTAATTCCTGTGCATGTTCCTCACAGTCCTGAAAAATTAGATTCGAAGCAGTTTCCCTCCAATGTAGCAAAATTAAGCTCTGTCTCTCCACTAAAATCACCTCTGTTGGTACCTGCAACTAAGTCAAATGCTGAGCGGAATAAAGCTTCGAAACTGTCGCTTAAAATTTCCAGTAATGCTACTCAAAAGAGAGCAGATCACGGGCCTTCAAAGTCTTCACATAACCTTAGCTCTTCTCAGAATCAAGTTGTGACTCATAAAAAGAAGCTTGCATTGTCTGCAGAAATTTTTAAAACTACTCCGGAAACATTGCCTCAGGCAGTTGAAGTTTTTGCTTCAACAGTTGGTTCTAAGGTTCCTGATGCTCTACATGTTGATAGATTGGAGGTGGGCACAGAAGAGAAAAATAGTATATATACTGGTTCTGGGACTCCTGAATCTGCTAAAACTATGAAGCATCTTATTGCGGCTGCCCTGGCGAAAAGGAAACAAGCTCATTCGCAATGTCTTCCTTCTGGCTTTCCCAATGTTCAGGATGGGACTCCTAGCCCCTCCGCAGTTCAGCCATATCTGCCTGTCTCGAGCAATTTTGTGCAGGCAGATATACAGGGAGTTTATGAGCACACAACATTGGCTTCTCCACCAACTAAAGAGCTTCACTCTTCTTCTCGTAATCAACTTGATGCTGATGACATTGAGGAGAGGAGAGTTGGTTCAGTGCAAAGGGGTCTAGGAGGCTCGCTGAGTGGTGGTACTGAGGCTGCTGTTGCTCGTGAAGCTTTTGAAGGAATGATTGAAACATTGTCAAGGACCAAGGAAAGCATTGGCCGTGCAACTCGTCTTGCCATTGATTGTGCCAAGTATGGCATTGCCAACGAGGTTGTTGAACTTCTCATCCGAAAGCTGGAAACTGAAACTAGTTTTCATCGCAAAGTAGATTTGTTTTTTCTTGTTGATTCCATCACCCAGTGCTCACATAATCAAAAAGGCATTGCAGGAGCCTCCTACATTCCTACTGTTCAGGCAGCGTTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCAAGTGCCCGTGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATTTTTCCTGAATCAGTTCTTCGCCATTACATGGATGATATTGGAGTTTCAAATGATGATATGACAGTTAGCTTTTCTCTCAGACGTCCATCTCGAGCAGAGCGATCTGTGGACGACCCAATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACATTTCAGCTGCCTGGGTTTTTATCTTCACATGCATTTGAAGAAGATGAAGATGAATATGAAGATGCTATACCAATCAATTCGTGTAAGGAAACATGTGATGCGTCTCCAGCAGATCCCCCACATACCCTTGGAGAATCAGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTAAAGGATGTGGATGGTGAGCTGGAGATGGAAGATGTTTCAGGTCACCCAAAGGATGAAAGACCCATATTTTTTGACAGTTATGATGAAATTGATTTGCAACATCAGGACTCAGATAGGAATTTAGATCCAACTTCAAACATTTCAGAAGAGATGTCAGCTACTCCAGAGGGTTCTCCTCCTATGCCACTTGATTCACCTCCCCCACCCCCACCTTTGCCTTCATCACCTCCGCCACCTCCTCCTCCATTATCTCCATCTCCCCCCCCACCTCCCCCACCCCCAATGTTGCAACCCCCGCTTCCTCCTTTACCACCTTCAGCCCCTCAGGTGTCATTGGTTCCTCAATCGTCTGGACCAGCTCGGCCACTTCTCTCCCAGTCATTAATGCCACCTCAGTCATCACATCAGTCTTCCCCACAGTTGGGTTATCAGCAGAGTGTACCTCATGACTTTAGTGGCACTACTAATTCATCTGTGCAGGGTAACCAAATAGTTCCAATGGTTGGGAATTCTTTTCCCGGAGGTCACAATAATGCAGTTGTCAAGAATGAAGTATTTCCACAGCCAACTGCTTATGCTCCAACCGCAGGCTGCAGCTCCCAGGAACCTTCTGGTTTTAACCCTTCAAGGCAATTAGAATACGGACAGAATGACATGTACCTAAATGCTCAAGTTCCTCAACCTAACCATCAATTTCAGCAGGGTAATCCCCCATTTGCTCAGAGGCACGCACATCCTGCCCCACCCCAAAATCCACCAAATCTATACTCATATTCAAATCCTACAGTTCAGCAGCATCTTCCACATTCATTCCATCCTCCCTTCCCTTTACCATCCCTTCCAGATGGCCGAAGACAATTTGTTGCTGATGAGCAATGGAGAGTGTCATCAAGTGAATTTAAAACAAACAATCAACATGGTGTATGGAGAGGGAGAAATCCTTCTTCATGTCCTGGTCCACCCTATGGGCAAGAAGGCCATTTTCGGCCGTCACTTGAAAGGCCGCCAGTAAGCACTGTAGGTTTTCAGCGACCAATTTCAGGCAACCTACCTGTTGCTCCAATAGCAGGACATGGTGTACCTCAGATGATGCCCTGTAGGCCAGACATTCCTGCTGTTAATAGTTGGAGACCCACTTGA 4371 0.4347 MAPGRRRGANKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWEKVPDPKKYFVQFFGTKEIAFVAPADIQAFTGEAKNKLSARLQGKTKYFAQAVKEISAAFDVMQKQKASGLADDTDDSHIGSEAPSNDGVVGNQKDAADAVVSNIEKNNIDMDNVCSNLEHYTQRIGENDSQDEKLSVSNHPNESSSVSSPMIKNKLAIGSETKKNANKSSFKGASNVNDFGQDDNGHSDLTNGTKPRKLDNGSRKKSEAAGGSNRNGGSSTGKFMKEGNCTGRGDLSRSGETLKAGKKRKNTFSVKLDSPDTLKSSDNGTTGEKDSNLMKVKTSHEVKNELQEISFDSEDADGKSSSMRKKTQLHAKHNVGGANESLHATKKLKRMDAKDDSTLGYTSKVLKRASPGSTVIEDKPFKKLESKKSTPNLKTEKSLPSRSQTGGAGSDDFVHELLPGTKHHSQVQQIMPDSAGIASDEKNERSSLRPKGDTNNVVIKQLERKRRAVCLFDDDDDDEPKTPVHGGAAKNMKSSSVSEFKKSNNVHSEKSDVVQMAQKNSSELEDTHLKEPSSQLHDDHLSIQQPLKEKDDEVIPVHVPHSPEKLDSKQFPSNVAKLSSVSPLKSPLLVPATKSNAERNKASKLSLKISSNATQKRADHGPSKSSHNLSSSQNQVVTHKKKLALSAEIFKTTPETLPQAVEVFASTVGSKVPDALHVDRLEVGTEEKNSIYTGSGTPESAKTMKHLIAAALAKRKQAHSQCLPSGFPNVQDGTPSPSAVQPYLPVSSNFVQADIQGVYEHTTLASPPTKELHSSSRNQLDADDIEERRVGSVQRGLGGSLSGGTEAAVAREAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLETETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCLKVLRLWLERKIFPESVLRHYMDDIGVSNDDMTVSFSLRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGFLSSHAFEEDEDEYEDAIPINSCKETCDASPADPPHTLGESETSTVTPNDKRHCILKDVDGELEMEDVSGHPKDERPIFFDSYDEIDLQHQDSDRNLDPTSNISEEMSATPEGSPPMPLDSPPPPPPLPSSPPPPPPPLSPSPPPPPPPPMLQPPLPPLPPSAPQVSLVPQSSGPARPLLSQSLMPPQSSHQSSPQLGYQQSVPHDFSGTTNSSVQGNQIVPMVGNSFPGGHNNAVVKNEVFPQPTAYAPTAGCSSQEPSGFNPSRQLEYGQNDMYLNAQVPQPNHQFQQGNPPFAQRHAHPAPPQNPPNLYSYSNPTVQQHLPHSFHPPFPLPSLPDGRRQFVADEQWRVSSSEFKTNNQHGVWRGRNPSSCPGPPYGQEGHFRPSLERPPVSTVGFQRPISGNLPVAPIAGHGVPQMMPCRPDIPAVNSWRPT* 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0225 1456 MobiDBLite consensus disorder prediction 553 568 - -
Gso12g0225 1456 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 465 490 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 1136 1186 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 423 438 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 173 375 - -
Gso12g0225 1456 CDD HDGF_related 18 100 IPR035496 -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 285 300 - -
Gso12g0225 1456 ProSiteProfiles CID domain profile. 836 977 IPR006569 -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 182 234 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 503 568 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 1305 1355 - -
Gso12g0225 1456 PANTHER PROTEIN HUA2-LIKE 1 1 1456 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 408 422 - -
Gso12g0225 1456 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1456 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 1116 1130 - -
Gso12g0225 1456 Gene3D - 835 980 IPR008942 -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 235 250 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 1380 1414 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 1187 1238 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 301 322 - -
Gso12g0225 1456 SMART PWWP_4 18 75 IPR000313 -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 114 137 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 1112 1238 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 1047 1071 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 323 354 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 621 664 - -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 252 271 - -
Gso12g0225 1456 SUPERFAMILY Tudor/PWWP/MBT 15 111 - -
Gso12g0225 1456 Pfam CID domain 842 967 IPR006569 -
Gso12g0225 1456 Pfam PWWP domain 21 104 IPR000313 -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 406 446 - -
Gso12g0225 1456 SMART 558neu5 843 974 IPR006569 -
Gso12g0225 1456 MobiDBLite consensus disorder prediction 626 664 - -
Gso12g0225 1456 Gene3D - 10 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0225 Gso-Chr12 1910692 1922321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0225 - - gmx:100800279 2189.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0225 12 1910692 1922321 Gso11g0854 11 7634017 7645601 GST