Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0854 ATGGCTCCCGGGCGTCGACGCGGAGCGAACAAGGCTAAGGCCAATGGCCACTTGAGTTTGGGCGATCTTGTACTCGCTAAGGTCAAGGGCTTCCCCGCTTGGCCTGCGAAGATAAGCAGGCCTGAAGATTGGGACAAAGTCCCTGATCCGAAGAAATATTTTGTTCAATTCTTTGGTACAAAAGAAATAGCTTTTGTTGCCCCAGCAGATATTCAGGCATTTACCAGTGAGGCTAAAAATAAGTTGTCTGCTCGTCTTCAAGGCAAGACAAAGTACTTTGCCCAAGCTGTGAAGGAAATATGTGCAGCATTTGATGAGATGCAGAAACAGAAGGCTAGTGGTTTGGCAGATGACACCGATGATTCTCATATTGGTTCAGAGGCTCCTTCTAATGATGGGGTAGTAGGTAACCTAAAGGATGCTGCTGATGCTGTATCAAATGCAGAAAAAGATAACATTGATATGGATAATGTTTGCTCTAATTTGGAGTACTGTGTGCCGAGAATAGGAGAAAATGACAGCCAAGATGAAAAGCTCTCTGTATCTAACCATCCAAATGAAAGTTCTTCTGTTTCATCACCTGTGATAAAAAACAAATTAGCCATTGGTTCAGAGACAAAGAAAAATGCTAACAAATCTAGTTTTAAAGGTGCTAGTAATGTTAATGATTTTAGGCAAGATGCTAATGGGCATAGTGATTTAACAAATGGAACTAAGACAAGAAAGCTTGATAATGGCTCAAGGAAGAAAAGTGAAGCTGCAAGTGGTAGTAATAGAAATGGTGGATCATCTACTGGAAAATTTATGAAGGAGGGAAATTGTACTGGCCGTGGTGATCTTTCTAGGTCTGGAGAGACATTGAAAGCTGTGAAGAAAAGGAAAAATGCATTTTCTGTCAAATCAGATTCTCCAGATACTCTTAAGCCAAACGATAATGGTACTACTGGAGAAAAAGATAGCAACTTGATGAAAGTGAAAACAAGTCATGAGGTAAAAAATGAGCTGCAGGAGATCTCGTTTGATTCTGAGGATGCCGATGGTAAAAGTTCTAGTATGAGGAAGAAGACCCAACTTCATGCAAAGCATAATGTAGGAGGAGCAAATGAATCTTTACATGCTACCAAGAAGTTGAAGCTTATGGATGCCAAAGATGATTCAACTTTAGGGTATACTTCAAAAATTCTGAAAAGAGCTTCGCCTGTCTCTACTGTTATTGAAGACAGACCATTTAAAAAATTAGAATCTAAGAAGTCTACACCAAATTTGAAAACAGAAAAAAGCTTGCCATCAAGGGGTCAAATTGGTGGTGCAGGTTCTGATGATTCTGTCCATGAGTTACTACCTGGGACTAAACATCATAGCCAGGTTCAGAAAATTATGCCTGATTCTGCTGGCATTGCTTCTGATGAAAAGAAAGAAAGAAGTTTTCTTAGACCGAAAGGTGATACAAATAATGTTGTGATAAAACAAGTAGAGAGGAAACGTAGAGCTGTTTGCCTTTTTGATGATGACGACGACGACAAACCTAAAACTCCTGTTCATGGAGGAGCTGCAAAAAATATGAAATCGTCTTCTGTTTCAGAGGTCAAGAAGAGAAACATTGTACACTCAGAGAAGTCTGATGTTGTTCAGCTGGCTCAAAGAAATTCCAGTGAACTTGAGGACACCCATTTGAAAGAGCCGTCTTCACAATTACATGATGACCGTTTGTCAATTCAGCAGCCTCTAAAAGAGAAAGATGACGAAGTAATTCCTGTGCATGTCCCTTACAGTCCTGAAAAATTAGATTTGAAGCAGTTTCCCTCCAATGTGACAAAATTAAGCTCTGTCTCTCCACTAAAATCACCACAGTTGGTACCTGCAACTAAGTCAAATGCTGAGCGGAATAAAGTATCCAAAGTGTCGCTTAAAGTTTCCAGTAATGCTACTCAAAAGAGGGCAGAGCACGGGTCTTCAAAGTCTTCACATAACCTTAGCTCTTCTCAGAATCAAGTTGTGACTCATAAAAAGAAACCTGCAATGTCTGCAGAAATTTTTAAAACTACTTCGGAGACATTGCCTCAGGCAGTTGAAGTTCCTGCTACAACAGTTTGTTCTAAGGATCCTGATGCTCTACATGTTGATAGATTGGAGGTGGGCACAGAAGAGAAAAATAGTATATATACTGTTTCTGGGACTCCTGAATCTGCTAAAACTATGAAGCATCTTATTGCGGCTGCCCTGGCAAAAAGGAAACAAGCTCATTCACAATGTCTTCCTTCTGGCTTTCCCAATGTTCAGGAGGGGACTCCTAGCCCCTCCACAGTTCAGCCATTTCTGCCTGTCTCGAGCAATTTTGTGCCAGCAGATATACAGGGAGTTTATGAACACACAACATTGGCTTCTCCACCAACTAAAGAGCTTCACTCTGCTTCTCATAATCAACTTGATGCTGATGACATTGAGGAGAGGAGAGTTGGTTCAGTGCAAAGGGGTCTAGGAGGCTCGCTGAGTGGTGGTACTGAGGCTGCTGTTGCTCGTGAAGCTTTTGAAGGAATGATTGAAACATTGTCAAGGACCAAGGAAAGTATTGGCCGTGCAACTCGTCTTGCCATTGACTGTGCCAAGTATGGCATTGCGAACGAGGTTGTTGAACTTCTCATCCGAAAGTTGGAAACTGAAACTAGTTTTCATCGCAAAGTAGATTTGTTTTTTCTTGTTGATTCCATCACCCAGTGCTCACATAATCAAAAAGGCATTGCTGGAGCCTCCTACATCCCTACTGTTCAGGCAGCGTTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCTAGTGCCCGTGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATTTTTCCTGAATCAGTTCTTCGCCGTTACATGGATGATATTGGAGTTTCAAATGATGATATGACAGTTAGCTTTTCTCTCAGACGTCCATCTCGAGCAGAGCGATCTGTGGATGACCCAATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACGTTTCAGCTGCCTGGGTTTTTATCTTCACATGCATTTGAAGAAGATGAAGATGAATATGAAGATGCTATACCAATCAATTTGTGTAAGGAGACATGTGATGCGTCGCCAGCAGATCCCCCACATACCCTTGGAGAATCAGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTAAAGGATGTGGATGGCGAGCTGGAAATGGAAGATGTTTCAGGTTATCCAAAGGATGAAAGGCCCATATTTTTTAACAGTTCTGATGAAATTGATTTGCAACATCAGGACTCAGATAGGAATTTAGATCCAACTTCAAACATTTCAGAAGAGACGTCAGTTACTCCAGAGGGTTCTCCTCCTATGCCACTCGATTCACCTCCTCCACCCCCACCTTTGCCTTCGTCACCTCCGCCACCTCCTCCTCCATTATCTCCATCTCCTCCCCCACCTCCCCCACGCCCAATGTTGCAACCCCCACCTCCTCCTTTACCACCCTCAGCCCCTCCAGTGTCATTGGTTCCTCAATCGTCAGGACCAGCTCGGCCACTTCTCTCCCAGTCATTAATGCCATCTCAGTCATCACATCAGTCTTCCCCACAGTTGGGTTATCAGCAGAGTGTACCTCATGACTTTAGTGGCACTACTAATGGTAACCAAATAGTTCCAATGACTGGGAATTCTTTTCCTGGAGGTCACAATAATGCAGTTGTCAAGAATGAAGTATTTCCACAGCCCTCTGCTTATGCTCCAACAGCTGGCTGCAGCTCCCAGGAACCTTCTGGTTTTAACCCTTCAAGGCAATTAGAATACGGACAGAATGATATGTACCTAAATGCTCAAGTTCCTCAACCTAACCATCAATTTCAGCAGGGTAATCCCCCATTTGCTCAGAGGCATGCACATGCTGCCCCACCCCAAAATCCACCAAATCCATACTCATATTCAAATCCTACAGTTCAGCAGCATCTTCCACATTCATTCCATCCTCCCTTCCCTTTACCATCCCTTCCAGATGGCCGGAGACAATTTGTTGCTGATGAGCAATGGAGAATGTCATCGAGTGAATTTAAAACAAACAGTCAACATGGTGTATGGAGAGGGAGAAGTCCTTCATGTCCTGGTCCACCCTATGGGCAAGAAGGTCATTTTCGGCCATCACTTGAAAGGCCGCCAGTAAGCACTGTAGGTTTTCAGCGACCAATTTCAGGCAATCTACCTGTTGCTCCAATATCAGGACATGTACCTCAGATGATGCCCTGTAGGCCAGACATTCCTGCTGTTAATAGTTGGAGACCCACTTGA 4350 0.4329 MAPGRRRGANKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWDKVPDPKKYFVQFFGTKEIAFVAPADIQAFTSEAKNKLSARLQGKTKYFAQAVKEICAAFDEMQKQKASGLADDTDDSHIGSEAPSNDGVVGNLKDAADAVSNAEKDNIDMDNVCSNLEYCVPRIGENDSQDEKLSVSNHPNESSSVSSPVIKNKLAIGSETKKNANKSSFKGASNVNDFRQDANGHSDLTNGTKTRKLDNGSRKKSEAASGSNRNGGSSTGKFMKEGNCTGRGDLSRSGETLKAVKKRKNAFSVKSDSPDTLKPNDNGTTGEKDSNLMKVKTSHEVKNELQEISFDSEDADGKSSSMRKKTQLHAKHNVGGANESLHATKKLKLMDAKDDSTLGYTSKILKRASPVSTVIEDRPFKKLESKKSTPNLKTEKSLPSRGQIGGAGSDDSVHELLPGTKHHSQVQKIMPDSAGIASDEKKERSFLRPKGDTNNVVIKQVERKRRAVCLFDDDDDDKPKTPVHGGAAKNMKSSSVSEVKKRNIVHSEKSDVVQLAQRNSSELEDTHLKEPSSQLHDDRLSIQQPLKEKDDEVIPVHVPYSPEKLDLKQFPSNVTKLSSVSPLKSPQLVPATKSNAERNKVSKVSLKVSSNATQKRAEHGSSKSSHNLSSSQNQVVTHKKKPAMSAEIFKTTSETLPQAVEVPATTVCSKDPDALHVDRLEVGTEEKNSIYTVSGTPESAKTMKHLIAAALAKRKQAHSQCLPSGFPNVQEGTPSPSTVQPFLPVSSNFVPADIQGVYEHTTLASPPTKELHSASHNQLDADDIEERRVGSVQRGLGGSLSGGTEAAVAREAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLETETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCLKVLRLWLERKIFPESVLRRYMDDIGVSNDDMTVSFSLRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGFLSSHAFEEDEDEYEDAIPINLCKETCDASPADPPHTLGESETSTVTPNDKRHCILKDVDGELEMEDVSGYPKDERPIFFNSSDEIDLQHQDSDRNLDPTSNISEETSVTPEGSPPMPLDSPPPPPPLPSSPPPPPPPLSPSPPPPPPRPMLQPPPPPLPPSAPPVSLVPQSSGPARPLLSQSLMPSQSSHQSSPQLGYQQSVPHDFSGTTNGNQIVPMTGNSFPGGHNNAVVKNEVFPQPSAYAPTAGCSSQEPSGFNPSRQLEYGQNDMYLNAQVPQPNHQFQQGNPPFAQRHAHAAPPQNPPNPYSYSNPTVQQHLPHSFHPPFPLPSLPDGRRQFVADEQWRMSSSEFKTNSQHGVWRGRSPSCPGPPYGQEGHFRPSLERPPVSTVGFQRPISGNLPVAPISGHVPQMMPCRPDIPAVNSWRPT* 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0854 1449 ProSiteProfiles CID domain profile. 835 976 IPR006569 -
Gso11g0854 1449 SMART 558neu5 842 973 IPR006569 -
Gso11g0854 1449 Pfam CID domain 841 966 IPR006569 -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 1264 1284 - -
Gso11g0854 1449 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 552 568 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 284 299 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 607 669 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 502 568 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 1265 1284 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 250 270 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 1106 1252 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 1135 1188 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 1115 1131 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 300 321 - -
Gso11g0854 1449 Pfam PWWP domain 21 104 IPR000313 -
Gso11g0854 1449 Gene3D - 10 114 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 1045 1073 - -
Gso11g0854 1449 PANTHER PROTEIN HUA2-LIKE 1 1 1449 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 175 321 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 113 137 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 181 241 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 333 353 - -
Gso11g0854 1449 CDD HDGF_related 18 103 IPR035496 -
Gso11g0854 1449 SMART PWWP_4 18 75 IPR000313 -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 415 442 - -
Gso11g0854 1449 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1449 - -
Gso11g0854 1449 SUPERFAMILY Tudor/PWWP/MBT 13 109 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 333 365 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 1300 1327 - -
Gso11g0854 1449 MobiDBLite consensus disorder prediction 1194 1249 - -
Gso11g0854 1449 Gene3D - 834 979 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0854 Gso-Chr11 7634017 7645601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0854 - - gmx:100810034 2159.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0225 12 1910692 1922321 Gso11g0854 11 7634017 7645601 GST