Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0204 ATGGAGACAGTTTGGGGCAGCCTGAGCAGGAAGAAAAGTGGTGGAAACGGACAGCTTCTAGACGCTTCCAATATTATGGAGTTGGTTGAAAACCAGCAAGTTTTTACCACCTTGGTGGACCATAAGTTTCACAGACAAAGATGCCAAACTCTCTGTCAAACACCTCCAACCTGCTGCTCTCACTCCACTAATCCTCATTCTCATCACATCTATTTCGAGGAAAAAGTGAGCAAGAGTGAGTTCAAAGAGGTTCTCTCAGACATTCTATTGGGTATGGCTGCTGGACTGAAGCGTGACCCTATTGTGATACTTCGCATTGATGGGGAAGATCTTCTGGAGTTTGTTAATGGTTCAGGTTATGAAGCTGAAATGGTATCCATATTCTCTCAAATTGAGTCCCCTGACAGATCACTTCATGACCATATAATTGAAGCTCTTGGCAAGCTCACTGTTGAGCAAGGAATTCCTCCTACATCAGATTCTTGGGTATTGAGCAACATTGTGGAACCGGCACTGCTATCTCAAGATGGCTCTGATTTGGATAAGCCTGTTTCTCAAGAGACATTTTTGGAGGAATTTAAGATAGTCGCAATGAGTGTGGCTAATCATCTTAAGGAACAACCTGTCATAGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGTGTTAAGAGACTATTATCCAACAAGTTTGAATTGGACAAGACTTTGAGCTCAGCTATAGAGACTTTGCCCAAAGATCGAAATGGAAAGCTTTCAAAGGAGTATCTAAGGGTGACATTAGACACGGTGGCTCCATCTGCTGGTTTACCTCCTGTTGGTGCAATTGAAGAGATGGACAAGGTTATTGGTGAAGTCTTTAAGATGGTGAATGCAGATGATGCGAAGGTGGTGAAAGAAGACGAGTTCAAGAAACTATTAACTGAAATACTGGGGAGCATAATGTTGCAGTTGGAGGGAAATCCCATATCAGTTTCTTCAAATTCGGTAGTGCACGAGCCACTAGACTCATCTTCTACACTTCTGCAGCCATCCCCTAGTGAAACAGCAGCATAG 1056 0.4328 METVWGSLSRKKSGGNGQLLDASNIMELVENQQVFTTLVDHKFHRQRCQTLCQTPPTCCSHSTNPHSHHIYFEEKVSKSEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGSGYEAEMVSIFSQIESPDRSLHDHIIEALGKLTVEQGIPPTSDSWVLSNIVEPALLSQDGSDLDKPVSQETFLEEFKIVAMSVANHLKEQPVIVAHSENTFDGSGVKRLLSNKFELDKTLSSAIETLPKDRNGKLSKEYLRVTLDTVAPSAGLPPVGAIEEMDKVIGEVFKMVNADDAKVVKEDEFKKLLTEILGSIMLQLEGNPISVSSNSVVHEPLDSSSTLLQPSPSETAA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0204 351 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 349 - -
Gso12g0204 351 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 349 - -
Gso12g0204 351 SUPERFAMILY EF-hand 75 321 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0204 Gso-Chr12 1732701 1736879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0204 18 349 EF-hand Containing Proteins AT4G38810 58.496 4.36e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0204 - - gmx:100794455 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0204 12 1732701 1736879 Gso11g0831 11 7473101 7477671 GST