Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0831 ATGGAGAGAGGTTCGGGCAAGCTGAGCAGGAAGAAAAGTGGTGGTGGAAACGGACAGGTTCTAGACGGTTCTAATATTATGGAGTTGGTTGGAAACCAGCAAGTTTTCACCACCTTCGTGGACCATAAGTTTCACGAGTTAGACACAGACAAAGATGGCAAACTCTCTGTCAAAGAGCTCCAGCCTGCTGTTGCTGACATAGGAGCTGCTCTTGGTTTGCCTGCTCACGGCACTAATCCTGATTCTGATCACATCTATTCCGAGGTGTTGAATGAATTCACACATGGGAAGCAGGAAAACGTGAGCAAGAGTGAGTTCAAAGAGGTTCTCTCAGACATTCTTTTGGGTATGGCTGCTGGACTGAAGCGTGATCCAATTGTGATACTTCGCATTGATGGAGAAGATCTTTTGGAGTTTGTTAATGGTTCAGGTTATGAAGCTGAAATGAATTCCATATTCTCTCAGATTGAGTCCCCTAACAGATCACTTCATGATCATATAATTGAAGCTCTTGGCAAGCTCACTGTTGAACAAGGAATTCCTCCTACATCAGATTCTTGGGTTTTGAGCAACATTATGGAACCCGCACTGCTATCTCAAGCTGGCTCTGATTTGGATAAGTCCGTTTCTCAAGAGACATTTTTGGAGGAATTTAAGATAGTGGCAATGAGTGTGGCTAATCGTCTTAAGGAGCAACCTGTCATAGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGTGTTAAGAGACTATTATCCAACAAGTTTGAATTGGACAAGATTTTGAACTCAGCCATGGAGACTATGCCAAAAGATCGAAATGGAAAGCTTTCAAAGGAGTATCTAAGGGTGGCACTGGACACGGTGGCTCCATCTGCTGGTTTACCTCCTGTTGGTGCAATTGAAGAGATGGACAAGGTTATTGGTGAAGTCTTTAAGATGGTGAATGCAGATGATGCGAAGGTGGTGAAAGAAGACGAATTCAAGAAACTATTAACTGAAATACTGGGGAACATAATGTTGCAGTTGGAGGGAAATCCCATATCAGTTTCTTCAAATTCGGTAGTACACGAGCCACTAGACTCTTCTTCTACACTTCTGCAGCCATCCCCTAGTGAAACAGCAGCATAG 1131 0.4359 MERGSGKLSRKKSGGGNGQVLDGSNIMELVGNQQVFTTFVDHKFHELDTDKDGKLSVKELQPAVADIGAALGLPAHGTNPDSDHIYSEVLNEFTHGKQENVSKSEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGSGYEAEMNSIFSQIESPNRSLHDHIIEALGKLTVEQGIPPTSDSWVLSNIMEPALLSQAGSDLDKSVSQETFLEEFKIVAMSVANRLKEQPVIVAHSENTFDGSGVKRLLSNKFELDKILNSAMETMPKDRNGKLSKEYLRVALDTVAPSAGLPPVGAIEEMDKVIGEVFKMVNADDAKVVKEDEFKKLLTEILGNIMLQLEGNPISVSSNSVVHEPLDSSSTLLQPSPSETAA* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0831 376 ProSiteProfiles EF-hand calcium-binding domain profile. 35 70 IPR002048 GO:0005509
Gso11g0831 376 SMART efh_1 307 335 IPR002048 GO:0005509
Gso11g0831 376 SMART efh_1 39 67 IPR002048 GO:0005509
Gso11g0831 376 SMART efh_1 261 289 IPR002048 GO:0005509
Gso11g0831 376 Gene3D - 145 346 - -
Gso11g0831 376 Gene3D - 5 121 - -
Gso11g0831 376 SUPERFAMILY EF-hand 43 346 IPR011992 -
Gso11g0831 376 MobiDBLite consensus disorder prediction 1 21 - -
Gso11g0831 376 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 374 - -
Gso11g0831 376 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 374 - -
Gso11g0831 376 ProSitePatterns EF-hand calcium-binding domain. 48 60 IPR018247 -
Gso11g0831 376 ProSiteProfiles EF-hand calcium-binding domain profile. 257 292 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0831 Gso-Chr11 7473101 7477671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0831 19 374 EF-hand Containing Proteins AT4G38810 69.638 3.12e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0831 - - gmx:100820516 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0204 12 1732701 1736879 Gso11g0831 11 7473101 7477671 GST