Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0191 ATGGCAAGTGGTGGCACTTATTTGTCCTTGGCAATGTTGGTGGTTGCAGGATCTTTAATATATAACACAAAAGAGGTTTCAGGTCAATGTGGAGGAAGTCTTTCAGATCTTATAGCACAATGCTCACAGTATGTGCAAAAGTCAGGACCAAAGATTCCACCTTCAGCGACGTGCTGTGCAGCGTTGAGAAAGTTTAATGTGCCATGCGCATGCAAACTCGTTACTAAAGAAGCTGCAAGCCTTGTGAGCATTCCAAAGGTCGTCTTTGTTGGACGCTCTTGTGGATTGAACCTTCCCCCCGGAATGCAATGTGGAGCTGTTAAAATTCCGCCGAAGGCCATGAAGTGA 348 0.4569 MASGGTYLSLAMLVVAGSLIYNTKEVSGQCGGSLSDLIAQCSQYVQKSGPKIPPSATCCAALRKFNVPCACKLVTKEAASLVSIPKVVFVGRSCGLNLPPGMQCGAVKIPPKAMK* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0191 115 CDD nsLTP_like 30 100 IPR044741 -
Gso12g0191 115 Pfam Probable lipid transfer 10 104 IPR016140 -
Gso12g0191 115 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 106 IPR036312 -
Gso12g0191 115 PANTHER LIPID TRANSFER PROTEIN 6 112 - -
Gso12g0191 115 Gene3D - 27 102 IPR036312 -
Gso12g0191 115 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0191 Gso-Chr12 1602544 1604309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0191 8 110 Acyl Lipid Metabolism Gene Families AT4G33550 38.462 1.96e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0191 - - gmx:112998582 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0191 12 1602544 1604309 Gso11g0815 11 7322999 7324146 GST