Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0815 ATGGCAAGTTATAGCACTTATTTGTCCTTGGCAATATTGGTGGTTGCTGGATCTTTAATGTACAACACAAAAGAGGTTTCAGCTCAATGTGGAGGAAGTCTTACGGATCTCATAGCACAGTGCTCACAGTATGTGCAAAAGTCGGGACCACAAATCAAGCCTTCAGCGGCGTGTTGTGCAGTGCTGAGAAAATTTAATGTGCAATGTGCATGCAAACTTATTACTAAGGAAGTTGCAAGCCTTGTGAGTATTCCAAAGGCCGTTTTTGTTGCACGCACTTGTGGATTCAACCTTCCTCCCGGGATGCATTGTGGAGCTGTTAAAATTCCGCCGAAGGCCATGAAGTGA 348 0.4454 MASYSTYLSLAILVVAGSLMYNTKEVSAQCGGSLTDLIAQCSQYVQKSGPQIKPSAACCAVLRKFNVQCACKLITKEVASLVSIPKAVFVARTCGFNLPPGMHCGAVKIPPKAMK* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0815 115 Pfam Probable lipid transfer 10 104 IPR016140 -
Gso11g0815 115 CDD nsLTP_like 30 100 IPR044741 -
Gso11g0815 115 Gene3D - 27 102 IPR036312 -
Gso11g0815 115 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 105 IPR036312 -
Gso11g0815 115 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 4 112 - -
Gso11g0815 115 SMART aai_6 41 104 IPR016140 -
Gso11g0815 115 PANTHER LIPID TRANSFER PROTEIN 4 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0815 Gso-Chr11 7322999 7324146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0815 8 110 Acyl Lipid Metabolism Gene Families AT4G33550 36.190 7.04e-22 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0815 - - gmx:112998582 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0191 12 1602544 1604309 Gso11g0815 11 7322999 7324146 GST