Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0174 ATGACTCTTCCTCCATCCTTATCGGAGCCGCCCTCACTCTCCGACTCATTCTCGCCGTTAAACCCAGCCCTAGCCATGGATAGTCTTCAAGCCACTTACAAAGACGAAGAAGATGAAGAAGACGAGCCGCAGCCTCAACCACCACCAACCACCGCCGATTCACCTGAAGCCCCTCCCGCCACCACCAGCACACCCTCCGACACCCCAACCGAACCCCCGAACGACGCCCGATCGGAGCCCGAGCCCTCCGAAGATCTCTCCGAGGACGAGGCCGCCTCCGACGGCTCCAAGAAATCCCCCAAATCCGGCCGCGAAGAAGGCGACGCCTCCGACGAGGACCCACCGCCGAAGAAGCAGAAGCAGCTCTCCTCTCTGACGGAGGCAACGAAGGAGGACTTGGTAGCGCCGCAGGATGGCACCAACAACGCGGCGGCGACGCCGGCAACAAATGGCGCGGCGCCGAAGAAATCGAAAAAGAAAAACAACAACGTGTGGGCGACGAAGTCGACGCGGAAGGGGAAGAAGAAAACGAATCGGAACAACAACAACAACAACAGCAACAACAACAACAACCACAACCACCACGCGAACGGCGAGGACAACGTGCTGATAACGCCGGTGCCGCGGTTCCCGGACAAGAGCGACGACACGGAGGACATGAAGATTTGCCTCTCGAAGGTGTACAAAGCGGAGAAGGTGGAATTGAGCGAGGACAGAATGAGCGCGGGGAGCACCAAGGGTTACAGAATGGTTAGGGCCACGCGCGGGGTGGTGGAAGGCGCGTGGTACTTTGAGATTAGGGTTGTGAAGTTGGGAGAGAGTGGGCACACGCGCCTCGGGTGGTCGACTGAGAAGGGTGATTTGCAGGCGCCGGTTGGGTACGACGGGAATAGCTTTGGGTATAGGGATATTGATGGGAGTAAGATTCATAAGGCTCTTAGGGAGAAGTATGGAGAGGAAGGGTACAAGGAAGGGGATGTTATTGGTTTCTATATCAATTTGCCTGGTGGGGAACAGTATGCCCCTAAATCATCTCAATTGGTTTGGTATAAGGGCCAGAGATATGTTTATGCACAAGATTCTAAGGAAGATCCACCCAAACTAGTGCCTGGAAGTGAGATATCATTCTTTAAAAATGGCATATGCCAAGGTGTAGCTTTCAAGGATCTTCACGGTGGTCGTTACTATCCTGCTGCTTCAATGTTTACTCTCCCCAATGAACCAAACTGCACGGTGAAGTTCAACTTTGGTCCCGACTTTGAGTGTTTTCCTGAGGATTTCAATGAACGGCCAATTCCCAGGCCAATGAGTGAAGTTCCTTATCTTGGTTTTGACAATAAAGTTGAAAATGAAGAGTCTAACGAGAAGAAATCCCAGAAAGAGTGA 1386 0.5317 MTLPPSLSEPPSLSDSFSPLNPALAMDSLQATYKDEEDEEDEPQPQPPPTTADSPEAPPATTSTPSDTPTEPPNDARSEPEPSEDLSEDEAASDGSKKSPKSGREEGDASDEDPPPKKQKQLSSLTEATKEDLVAPQDGTNNAAATPATNGAAPKKSKKKNNNVWATKSTRKGKKKTNRNNNNNNSNNNNNHNHHANGEDNVLITPVPRFPDKSDDTEDMKICLSKVYKAEKVELSEDRMSAGSTKGYRMVRATRGVVEGAWYFEIRVVKLGESGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKIHKALREKYGEEGYKEGDVIGFYINLPGGEQYAPKSSQLVWYKGQRYVYAQDSKEDPPKLVPGSEISFFKNGICQGVAFKDLHGGRYYPAASMFTLPNEPNCTVKFNFGPDFECFPEDFNERPIPRPMSEVPYLGFDNKVENEESNEKKSQKE* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0174 461 Gene3D - 220 438 IPR043136 -
Gso12g0174 461 MobiDBLite consensus disorder prediction 1 25 - -
Gso12g0174 461 SUPERFAMILY Concanavalin A-like lectins/glucanases 221 424 IPR013320 -
Gso12g0174 461 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 19 450 IPR037353 GO:0048188|GO:0051568
Gso12g0174 461 MobiDBLite consensus disorder prediction 439 461 - -
Gso12g0174 461 SMART SPRY_3 259 420 IPR003877 GO:0005515
Gso12g0174 461 Pfam SPRY domain 262 337 IPR003877 GO:0005515
Gso12g0174 461 MobiDBLite consensus disorder prediction 1 201 - -
Gso12g0174 461 MobiDBLite consensus disorder prediction 179 198 - -
Gso12g0174 461 MobiDBLite consensus disorder prediction 90 118 - -
Gso12g0174 461 ProSiteProfiles B30.2/SPRY domain profile. 202 390 IPR001870 -
Gso12g0174 461 MobiDBLite consensus disorder prediction 56 73 - -
Gso12g0174 461 CDD SPRY_Ash2 233 420 - -
Gso12g0174 461 MobiDBLite consensus disorder prediction 119 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0174 Gso-Chr12 1433038 1437212 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0174 K14964 - gmx:100816796 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0174 12 1433038 1437212 Gso11g0796 11 7147336 7151368 GST