Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0796 ATGACTCTTCCTCCATCCTTATCGGAGCCACCCTCATTTTCCGATTCATTCTCACCGTTAAACCCAACCCTAGCCATGGATAGTCTCCAAGCCACTTACAAAGACGAAGAAGAAGATGACGAAGACGACCCACAGCCGCAACCACCACCAACCACCGCCACAACCACCGACGCCGATTCACTGGAAGCCCCTCCCGCCACCACCAGCACCCCATCCGACACCCCAACCGAACCCCCGAACGACGCCCGATCGGAGCCCGACCCCTCTGACGACCTCTCCGAAGATGAGGCCGCCTCCGACGGCTCCAAGAAGTCCCCGAAATCCGGCCGCGAAGAAGGCGACGGCTCCGACGAGGACCCGCCGCCGAAGAAGCAGAAGCAGCTCTCCTCTCTCACGGTGGATACAAAGGAGGAGGATGGAACCAACAATGCGGCGGCGACCGCTACGCCGGCAACGAACGGCTCGGCACCGAAGAAATCGAAGAAGAAGAGCAACAACGTGTGGGCGACGAAGTCGACGCGGAAGGGGAAGAAGAAGACAAATCGCAACAACAACAACAACAACAGCAACAACAACAACAACCACCACCACCACGCGAACGGCGAGGACAACGTGCTTATAACGCCGGTGCCGCGGTTCCCGGACAAGAGCGACGACACGGAGGAGATGAAGATATGCCTCTCAAAGGTGTACAAAGCGGAGAAGGTGGAACTGAGCGAGGACAGAATGAGCGCGGGGAGTACCAAGGGTTACAGAATGGTGAGGGCCACGCGCGGGGTGGTGGTGGGCGCGTGGTACTTCGAGATTAGGGTTGTGAAGTTGGGGGAGAGTGGGCACACGCGCCTTGGGTGGTCGACCGAGAAGGGTGATTTGCAGGCGCCGGTTGGGTACGATGGGAATAGCTTTGGGTATAGGGATATTGATGGGAGTAAGATTCATGAGGCGCTAAGGGAGAAGTATGGAGAGGAAGGGTACAAGGAAGGGGATGTTATTGGTTTCTATATCAATTTGCCTGATGGGGAACAGTATGCCCCCAAATCATCTCAATTGGTTTGGTATAAGGGCCAGAGATATGTTTATGCACAAGATTCTACGCAAGATCCACCCAAACTAGTGCCTGGAAGTGAGATATCATTCTTTAAAAATGGCATATGCCAAGGTGTAGCTTTTAAGGATCTCCAAGGTGGTCGTTACTATCCTGCTGCTTCAATGTTTACTCTCCCCAATGAACCAAACTGCACGGTCAAGTTCAACTTTGGTCCCGACTTTGAATGTTTTCCTGAGGATTTCAATGAACGGCCAATTCCCAGGCCAATGAGTGAAGTTCCTTATCTTGGTTTTGACAATAAAGTTGAAAATGAAGAGTCTAATGAGAAGAAATCCCAGAAAGAGTGA 1395 0.5305 MTLPPSLSEPPSFSDSFSPLNPTLAMDSLQATYKDEEEDDEDDPQPQPPPTTATTTDADSLEAPPATTSTPSDTPTEPPNDARSEPDPSDDLSEDEAASDGSKKSPKSGREEGDGSDEDPPPKKQKQLSSLTVDTKEEDGTNNAAATATPATNGSAPKKSKKKSNNVWATKSTRKGKKKTNRNNNNNNSNNNNNHHHHANGEDNVLITPVPRFPDKSDDTEEMKICLSKVYKAEKVELSEDRMSAGSTKGYRMVRATRGVVVGAWYFEIRVVKLGESGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKIHEALREKYGEEGYKEGDVIGFYINLPDGEQYAPKSSQLVWYKGQRYVYAQDSTQDPPKLVPGSEISFFKNGICQGVAFKDLQGGRYYPAASMFTLPNEPNCTVKFNFGPDFECFPEDFNERPIPRPMSEVPYLGFDNKVENEESNEKKSQKE* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0796 464 MobiDBLite consensus disorder prediction 125 171 - -
Gso11g0796 464 MobiDBLite consensus disorder prediction 96 124 - -
Gso11g0796 464 ProSiteProfiles B30.2/SPRY domain profile. 205 393 IPR001870 -
Gso11g0796 464 Gene3D - 223 441 IPR043136 -
Gso11g0796 464 MobiDBLite consensus disorder prediction 1 28 - -
Gso11g0796 464 SUPERFAMILY Concanavalin A-like lectins/glucanases 224 427 IPR013320 -
Gso11g0796 464 MobiDBLite consensus disorder prediction 1 206 - -
Gso11g0796 464 MobiDBLite consensus disorder prediction 52 79 - -
Gso11g0796 464 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 24 453 IPR037353 GO:0048188|GO:0051568
Gso11g0796 464 SMART SPRY_3 262 423 IPR003877 GO:0005515
Gso11g0796 464 Pfam SPRY domain 265 341 IPR003877 GO:0005515
Gso11g0796 464 CDD SPRY_Ash2 236 423 - -
Gso11g0796 464 MobiDBLite consensus disorder prediction 434 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0796 Gso-Chr11 7147336 7151368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0796 K14964 - gmx:100796715 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0796 11 7147336 7151368 Gso11g0796 11 7147336 7151368 ECH
Gso12g0174 12 1433038 1437212 Gso11g0796 11 7147336 7151368 GST