Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0172 ATGTCGATCGCTTTTTCCTTCTTCACTCCACTCTCTTCCAAATCCCTTCCATCCTTTTCCCTCTCTACCCCTTCTCTCTGTTTTCGCCTCACTCCCCTCCGCCGCCCCACCGATCGCTTTTACCCTCTCCGCTCCTCCGCCGGAGGCCCTGGCGGCGGATCCTTCGGAGGCCACGGCGGTCCCGGACACGGAGGACATGGTGGCGGCGGCGGCGGCGGTCACGACAACGACGACAATGAGAGAAAGAACGAGGCTTTATTGGTGGTGGCGGAGGCGGGGAGGTCGTTGGAGAGCGTGCCGGTGGACCTGGCGGCGGCGATAAAGGACGGCAAGATTCCGGCGTCGGTGGTGAGTCGCTTTCTCGAATTGGAGAAGTCTCCGTTCTTCCGGTGGCTGCTTCAGTTCACTGGGTTCAGGGAGCGTCTTCTCGCTGATGATCTCTTCCTCGCAAAGGTTGCTATGGAATGCGGCGTTGGCGTCTTCACCAAGACTGCTGCTGAGTACGAAAAAAGAAGAGAAAACTTTTTCAATGAGCTCGAAATTGTCTTCGCTGATGTGGCTATGGCCATAATTGCAGATTTCATGTTGGTTTATCTTCCTGCTCCTACCGTAGCGCTTAGACCGCCACTTGCACTCACTGCAGGGCCTATTGCTAAGTTTTTCCATGGCTGCCCGGATAATGCATTTCAGGTTGCACTATCTGGAGCATCATATTCCTTGATACAGAGGGTTGGTGCTATTGTGCGTAATGGGGCTAAGCTTTTTGCAGTTGGAACTGCTTCATCCCTGGTTGGGACAGCTATGACAAATGCCTTCATTAATGCAAAGAAGGCAGTTAACAAGACTTCTGAAGGGGAAATTGAGAATGTTCCCATATTGTCAACCAGTGCTGCTTATGGTGTCTATATGGCAGTTTCTAGCAACCTCAGGTATCAAGTACTTGCTGGAATTATTGAACAGAGGCTTTTGGAACCTTTGCTGCACCAGCACAAACTTATCCTTAGTGCACTTTGTTTTGCTGTGCGGACTGGCAATACATATTTGGGTTCATTATTGTGGGTGGATTATGCTCGTTTTGTAGGGGTTCAATAG 1092 0.5128 MSIAFSFFTPLSSKSLPSFSLSTPSLCFRLTPLRRPTDRFYPLRSSAGGPGGGSFGGHGGPGHGGHGGGGGGGHDNDDNERKNEALLVVAEAGRSLESVPVDLAAAIKDGKIPASVVSRFLELEKSPFFRWLLQFTGFRERLLADDLFLAKVAMECGVGVFTKTAAEYEKRRENFFNELEIVFADVAMAIIADFMLVYLPAPTVALRPPLALTAGPIAKFFHGCPDNAFQVALSGASYSLIQRVGAIVRNGAKLFAVGTASSLVGTAMTNAFINAKKAVNKTSEGEIENVPILSTSAAYGVYMAVSSNLRYQVLAGIIEQRLLEPLLHQHKLILSALCFAVRTGNTYLGSLLWVDYARFVGVQ* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0172 363 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 21 363 - -
Gso12g0172 363 PANTHER PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC 21 363 - -
Gso12g0172 363 MobiDBLite consensus disorder prediction 51 79 - -
Gso12g0172 363 Pfam Protein RETICULATA-related 140 317 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0172 Gso-Chr12 1414527 1418241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0172 - - gmx:100811998 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0172 12 1414527 1418241 Gso11g0794 11 7126125 7129970 GST