Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0794 ATGTCGATCGCTTTTTCCTTCTTCACTCCACTCTCTTCCTCTTCCAAATCCATTCCCTCATTTTCCCTCTCTACCCCTACCCCCCCTCTCCGTTTCCGCCTCACTCCCCTCCGCCGCCCCACTGATCGCTTTTACCCTCTCCGCTCCTCCACCGGAGTCCCTGACGGCGGATCCTTCGGAGGCCACGGCGGTCACGGACACGGAGGACATGGTGGTCACGGTGGTGGCGGCGGTCATGACAACGAGGACAATGGGAGAAAGAACGAGGCTTTATTGGTGGTGGCGGAGGCGGGGAGGTCGTTGGAGAGCGTGCCGGCGGACCTGGCGGCGGCGATAAAAGCCGGGAAGATTCCGGCGTCGGTGGTCACTCGCTTTCTCGAACTGGAGAAGTCTCCGTTCTTCCGGTGGCTGCTTCAGTTCGCTGGGTTCAGAGAGCGTCTCCTCGCGGATGATCTCTTCCTCGCAAAGGTTGCTATGGAATGCGGCGTTGGCGTTTTCACCAAGACTGCTGCTGAGTACGAAAAAAGAAAAGAAAACTTTTTCAACGAGATCGAAATTGTCTTCGCGGATGTGGCGATGGCCATAATTGCAGATTTCATGTTGGTTTATCTTCCTGCGCCTACCGTAGCTCTTAGACCGCCACTCGCACTCACTGCAGGGCCTGTTGCTAAGTTTTTCCATGGCTGCCCCGATAATGCTTTTCAGGTTGCTCTCTCCGGAGCATCATATTCCTTGATACAGAGGGTTGGTGCAATTGTGCGTAATGGGGCTAAGCTTTTTGCAGTTGGAACTGCTTCATCACTGGTTGGGACAGCTATGACAAATGCCTTCATTAATGCAAAGAAGGCAGTTAACAAGACTTCTGAAGGGGAAATTGAGAATGTTCCCGTATTGTCTACCAGTGCTGCCTATGGTGTCTATATGGCAGTTTCTAGCAACCTCAGGTATCAAGTACTTGCTGGAATTATTGAACAGAGGCTTTTGGAACCTTTGTTGCACCAGCACAAACTTATCCTTAGTGCACTTTGTTTTGCTGTGCGGACTGGCAATACATATTTGGGTTCATTATTGTGGGTGGATTATGCTCGTTTTGTAGGGGTTCAATAG 1107 0.5167 MSIAFSFFTPLSSSSKSIPSFSLSTPTPPLRFRLTPLRRPTDRFYPLRSSTGVPDGGSFGGHGGHGHGGHGGHGGGGGHDNEDNGRKNEALLVVAEAGRSLESVPADLAAAIKAGKIPASVVTRFLELEKSPFFRWLLQFAGFRERLLADDLFLAKVAMECGVGVFTKTAAEYEKRKENFFNEIEIVFADVAMAIIADFMLVYLPAPTVALRPPLALTAGPVAKFFHGCPDNAFQVALSGASYSLIQRVGAIVRNGAKLFAVGTASSLVGTAMTNAFINAKKAVNKTSEGEIENVPVLSTSAAYGVYMAVSSNLRYQVLAGIIEQRLLEPLLHQHKLILSALCFAVRTGNTYLGSLLWVDYARFVGVQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0794 368 Pfam Protein RETICULATA-related 145 322 IPR021825 -
Gso11g0794 368 PANTHER PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC 16 368 - -
Gso11g0794 368 MobiDBLite consensus disorder prediction 55 85 - -
Gso11g0794 368 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 16 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0794 Gso-Chr11 7126125 7129970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0794 - - gmx:100796187 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0794 11 7126125 7129970 Gso11g0794 11 7126125 7129970 ECH
Gso12g0172 12 1414527 1418241 Gso11g0794 11 7126125 7129970 GST