Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0140 ATGTCCATGTCTCTGTCTCTTCTTCGTATCTTCTCTTCGCCCCACCTTTCCACCTCTCTCTTCTTTCCAACTCCAACTCTTTCTTCCCTCTGCCCTTCTTTCCTTCCCAAATTACCAAATGCACCCTCTCCCCTCATTGTTTTATGCCACAGGGACGCCTCAGCTTCGAAGCAAGGTCACCTCGGAGCCCATGAAGGTGCAGAACGTGACAGTGGGAGCGAAGAAGATGATGATGATGTTGAACAACCCATGAGGGCCAGTTACGACGACGACGAAGACGAAGAAGAAGGAGCTCTTAGCTCCTTAGTTTTTCCTGAAAGATGGGATGTATTGGGTCTCGGTCAAGCCATGGTAGACTTCTCTGGCATGGTTGATGATAATTTCCTGAAGAATTTGGGATTGGAGAAGGGAACACGGAAAGTAGTAAATCATGAGGAAAGAGGTAGAGTTTTGCAGGCCATGGATGGGTGCAGCTATAAAGCTGCAGCTGGTGGATCTCTTTCTAATACCTTAGTTGCCCTCGCAAGACTTGGAAGTCGCTCCGAAAAAGTTCCTGCTATAAATGTGGCAATGACCGGTAGTGTTGGGAGTGATCTATTAGGGGGCTTCTACAGGGAAAAATTACGCCGAGCAAATGTGCAATTTCTTTCTGCACCAATCAAGGATGGGACTACTGGAACAGTTATAGTTCTCACAACTCCAGATGCCCAGCGCACAATGCTTGCATATCAGGGCACATCTTCAACTGTTAACTATGATGCATCCTTAGCTAATGCAGTTTCCAAGACAAACATACTTGTCGTCGAAGGGTATCTATTTGAACTTCCTGATACCATTAAAACAATAACCAAAGCATGTGAGAAAGCACGGTCGAACGGTGCCTTGGTTGCAATAACAGCTTCAGATGTCTCCTGCATTGAGAGACACTTTGATGATTTCTGGGAAATTATTGGGAATTGTGTGGATTTAGTCTTTGCAAATGGAAATGAGGCCAGAGCTCTTTGTAATTTTGAAGCAAAGGAAAGTGCTGCTTCAGCTGCAAGGTATCTGAGCCACTTTGTTCCTCTAGTATCCGTTACAGATGGTCCTACAGGCTCTTACATTGGTGTAAAAGGAGAAGCTGTATATATCCCTCCTTCTCCATGTGTTCCAGTTGATACTTGTGGTGCTGGGGATGCATATGCATCTGGCATACTCTATGGTCTTTTAAGAGGCATATCAGATTTGAGAAGCATAGGCTCATTAGCAGCTAAGGTTGCTGCCACTGTTGTTGGACAACAGGGAACTCGGCTTAGGATTTCAGATGCAGTCAAATTGGCTGAATCTTTTGAATTTCAACTTGATTCCTCCTCTGTTGGCACTGATCATAATATTTCCAGCGTCTAA 1386 0.4495 MSMSLSLLRIFSSPHLSTSLFFPTPTLSSLCPSFLPKLPNAPSPLIVLCHRDASASKQGHLGAHEGAERDSGSEEDDDDVEQPMRASYDDDEDEEEGALSSLVFPERWDVLGLGQAMVDFSGMVDDNFLKNLGLEKGTRKVVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGSRSEKVPAINVAMTGSVGSDLLGGFYREKLRRANVQFLSAPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDASLANAVSKTNILVVEGYLFELPDTIKTITKACEKARSNGALVAITASDVSCIERHFDDFWEIIGNCVDLVFANGNEARALCNFEAKESAASAARYLSHFVPLVSVTDGPTGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGLLRGISDLRSIGSLAAKVAATVVGQQGTRLRISDAVKLAESFEFQLDSSSVGTDHNISSV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0140 461 SUPERFAMILY Ribokinase-like 108 431 IPR029056 -
Gso12g0140 461 MobiDBLite consensus disorder prediction 57 96 - -
Gso12g0140 461 MobiDBLite consensus disorder prediction 71 96 - -
Gso12g0140 461 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 386 399 IPR002173 GO:0016773
Gso12g0140 461 CDD adenosine_kinase 107 432 - -
Gso12g0140 461 Pfam pfkB family carbohydrate kinase 159 431 IPR011611 -
Gso12g0140 461 Gene3D - 111 428 IPR029056 -
Gso12g0140 461 Gene3D - 117 243 - -
Gso12g0140 461 PANTHER HEXOKINASE FAMILY MEMBER 77 453 - -
Gso12g0140 461 PANTHER KINASE, PUTATIVE, EXPRESSED-RELATED 77 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0140 Gso-Chr12 1171872 1175147 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0140 - - gmx:100816996 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0140 12 1171872 1175147 Gso11g0928 11 8336860 8340268 GST