Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0928 ATGTCTCTGTCTCTTCTTCGTATCTACTCTTCCCCCCACCTTCTTTCCTCCTCTCTCTTCTTTCCAACCCCACCTCTCTCTTCTTTCCTTCCCAAATTACCAAATGCCCCCCGCACTCCCCACATTGTTTTATGCCACCGTAGGGACGCCTCCTCAGCTTCGAAGCAGCGAGTCCCAGAAGATACAGAATACGAACAACCCATGAGGACCAGTTACGACGACGACGAAGAAGAAGAAGAGGAATTTCTTGGCTCCTTAGTTTTGCCTGAAAGATGGGATGTACTGGGTCTCGGTCAAGCCATGGTAGATTTCTCTGGCATGGTTGATGATAATTTCCTCAAGAATTTGGGATTAGAGAAGGGAACACGGAAAGTAGTAAATCATGAGGAAAGAGGTAGAGTTTTGCAGGCTATGGATGGGTGCAGCTATAAAGCTGCAGCTGGAGGATCTCTTTCTAATACCTTAGTGGCCCTCGCAAGGCTTGCTAGTCGCTCCCAAAAAGTTCCCGCTATAAATGTCGCAATGACCGGTAGTGTAGGGAGTGATCTATTGGGGGGCTTCTACAGGGAGAAATTACGCCGAGCAAATGTGCAATTTCTTTCTGCACCAATGAAGGATGGGACAACTGGAACAGTTATAGTCCTCACAACTCCAGATGCCCAGCGCACAATGCTTGCATATCAGGGCACATCTTCAACTGTTAACTATGATGCATCCTTGGCTAGTGCAGTTTCCAAGACCAACATACTTGTTGTCGAAGGATATCTATTTGAACTTCCTGATACGATTAAAGCAATAACCAAAGCATGTGAGAAAGCACGGACAAATGGTGCCTTGGTTGCAATAACAGCTTCAGATGTCTCCTGCATTGAGAGACACTTTGATGATTTCTGGGAAATTATTGGGAATTGTGTGGATTTAGTCTTTGCAAATGGTGATGAGGCCAGAGCTCTTTGTAATTTTGAAGCAAAGGAAAGTGCTGCTTCAGCTGCAAGGTATCTGAGCCACTTTGTTCCTCTAGCATCCGTTACAGATGGTCCTACAGGCTCTTACATAGGTGTAAAAGGAGAAGCTGTATATATCCCTCCTTCTCCATGTGTTCCAGTTGATACTTGTGGTGCTGGGGATGCATATGCATCTGGCATACTCTATGGTCTTTTAAGAGGCATATCAGATTTGAGAAGCATAGGCTCATTAGCCGCTAAGGTTGCTGCCACTGTTGTTGGACAACAGGGAACTCGGCTTAGAATTTCAGATGCAGTCAAATTGGCTGAATCTTTTGAATTTCAACTTGATTCCTCCTCCTCTGTTGGCACTGATCATAATATTTCCAGCGTCTAA 1341 0.4526 MSLSLLRIYSSPHLLSSSLFFPTPPLSSFLPKLPNAPRTPHIVLCHRRDASSASKQRVPEDTEYEQPMRTSYDDDEEEEEEFLGSLVLPERWDVLGLGQAMVDFSGMVDDNFLKNLGLEKGTRKVVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLASRSQKVPAINVAMTGSVGSDLLGGFYREKLRRANVQFLSAPMKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDASLASAVSKTNILVVEGYLFELPDTIKAITKACEKARTNGALVAITASDVSCIERHFDDFWEIIGNCVDLVFANGDEARALCNFEAKESAASAARYLSHFVPLASVTDGPTGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGLLRGISDLRSIGSLAAKVAATVVGQQGTRLRISDAVKLAESFEFQLDSSSSVGTDHNISSV* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0928 446 MobiDBLite consensus disorder prediction 48 69 - -
Gso11g0928 446 Pfam pfkB family carbohydrate kinase 143 415 IPR011611 -
Gso11g0928 446 PANTHER HEXOKINASE FAMILY MEMBER 63 438 - -
Gso11g0928 446 Gene3D - 101 227 - -
Gso11g0928 446 Gene3D - 95 412 IPR029056 -
Gso11g0928 446 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 370 383 IPR002173 GO:0016773
Gso11g0928 446 MobiDBLite consensus disorder prediction 48 77 - -
Gso11g0928 446 PANTHER KINASE, PUTATIVE, EXPRESSED-RELATED 63 438 - -
Gso11g0928 446 CDD adenosine_kinase 91 416 - -
Gso11g0928 446 SUPERFAMILY Ribokinase-like 92 415 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0928 Gso-Chr11 8336860 8340268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0928 - - gmx:100809829 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0140 12 1171872 1175147 Gso11g0928 11 8336860 8340268 GST