Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3634 ATGTTCTCCTCAACCAGATGCGCTTTCCTGAGCAACTCGGGATTAGGTGGGTGCAGCAGCTTGTGTGATGCTGCGCAGAAAAAGCGTTCAACTCGTTTGAGGGTGGTGAGTATGACCCCAAGCAGCAGCAGCAGCAGCAGGTCCGGTGATAGAAACGGCAGCGTTGTGATGGAGACGCCGTTGAAAGAATTGAAAAAGGAATCCACGGTGGCTGACGTGGACGATAACGCCATCTCCGCCGGCGGCCCTCAAGATGTCTACGGCGAGGATAGGGCTACGGAGGATCACTTTGTTACCCCTTGGAGTGTTTCTGTTGCCAGTGGTTATACACTATTGCGAGATCCCCATTTCAACAAAGGGTTGGCCTTCACTGAAGATGAGAGGGATGCCCACTACTTGCGTGGTCTTCTTCCCCCATCAGTTATTCCTCAAGAAACTCAGGTGAAGAAAATGATCCAGCACGTACGCCAGTATCAAGTTCCTTTGCAGAAGTACATGGCAATGATGGATCTTCAGGAGAGAAATGAACGGTTATTTTACAAACTTCTTATTGATCATGTTGAAGAGTTACTTCCAGTTGTATATACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGCAGCATCTTTATGCATCCTCAGGGTCTTTATATAAGTTTGAAAGAGAAGGGAAAGATCCGTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATAGTTGTAACTGATGGAGAACGGATCCTGGGTCTTGGGGATCTTGGTTGTCAGGGGATGGGAATACCAGTGGGAAAACTTTCTTTATATACAGCACTTGGAGGAGTCCGCCCTTCAGCTTGTTTACCCATTACAATTGATGTGGGCACAAACAATGAGAAGCTGCTGAATGATGAATTATATATTGGGCTAAAGCAAAGACGAGCAACTGGGCAGGAATATGCTGAACTTATGCACGAATTTATGACAGCAGTCAAGCAAACTTATGGGGAAAAGGTCCTAATTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTAATCTGCTTGAGAAATATAGATCTACACATCTGGTCTTTAATGATGATATTCAGGGAACAGCATCCGTGGTTCTTGCTGGACTAGTTGCATCTCTGAAGTTGGTTGGGGGTAACTTAGCTGATCACAGATTCTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGCATAGCAGAACTCATAGCACTTGAAACATCAAAACAGACAAATGCTCCACTGGAGGAAGTGCGCAAGAATATTTGGTTGGTGGACTCAAAGGGATTGATTGTCAGTTCTCGCAAAGATTCGCTCCAACATTTTAAGAAGCCCTGGGCTCATGAGCATGAACCTGTTAAAAATCTTCTAGATGCTGTTAATAAAATTAAGCCAACAGTGTTGATTGGAACATCGGGACAAGGAAGAACTTTTACTAAAGAAGTGATTGAGGCAATGGCTTCTATTAACAAGAGACCTATTATTCTTTCTCTTTCCAACCCTACGTCACAGTCAGAATGCACTGCTGAAGAAGCTTACAAGTGGAGCCAGGGACGTGCCATTTTTGCAAGTGGGAGTCCATTTCCCCCTGTTGAGTACGAGGGCAAAGTGTTTGTGCCTGGCCAGGCCAATAATGCATACATATTCCCTGGATTTGGTCTCGGTTTAATAATGTCTGGGACCATTCGAGTGCATGATGACCTGCTTCTGGCTGCCTCTGAGGCTTTGGCTGCACAAGTGAGCCAAGAGAACTTTGATAAGGGACTCATATACCCACCATTCACCAACATCAGAAAGATTTCAGCACACATAGCTGCCAATGTTGCTGCTAAGGCTTATGAACTTGGCTTGGCCACTCGCCTTCCTCAACCTAAAGATTTAGTGAAGTTTGCAGAGAGCTGTATGTATACCCCAGCCTACAGAAGCTACCGATGA 1944 0.4532 MFSSTRCAFLSNSGLGGCSSLCDAAQKKRSTRLRVVSMTPSSSSSSRSGDRNGSVVMETPLKELKKESTVADVDDNAISAGGPQDVYGEDRATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTEDERDAHYLRGLLPPSVIPQETQVKKMIQHVRQYQVPLQKYMAMMDLQERNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFMHPQGLYISLKEKGKIREVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYAELMHEFMTAVKQTYGEKVLIQFEDFANHNAFNLLEKYRSTHLVFNDDIQGTASVVLAGLVASLKLVGGNLADHRFLFLGAGEAGTGIAELIALETSKQTNAPLEEVRKNIWLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVKNLLDAVNKIKPTVLIGTSGQGRTFTKEVIEAMASINKRPIILSLSNPTSQSECTAEEAYKWSQGRAIFASGSPFPPVEYEGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAAQVSQENFDKGLIYPPFTNIRKISAHIAANVAAKAYELGLATRLPQPKDLVKFAESCMYTPAYRSYR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3634 647 SMART Malic_M_2 363 616 IPR012302 GO:0051287
Gso11g3634 647 ProSitePatterns Malic enzymes signature. 359 375 IPR015884 GO:0004471
Gso11g3634 647 Gene3D - 361 647 - -
Gso11g3634 647 PRINTS Malic enzyme signature 178 202 IPR001891 GO:0004470|GO:0004471
Gso11g3634 647 PRINTS Malic enzyme signature 238 267 IPR001891 GO:0004470|GO:0004471
Gso11g3634 647 PRINTS Malic enzyme signature 274 296 IPR001891 GO:0004470|GO:0004471
Gso11g3634 647 PRINTS Malic enzyme signature 334 352 IPR001891 GO:0004470|GO:0004471
Gso11g3634 647 PRINTS Malic enzyme signature 359 375 IPR001891 GO:0004470|GO:0004471
Gso11g3634 647 PRINTS Malic enzyme signature 390 406 IPR001891 GO:0004470|GO:0004471
Gso11g3634 647 PRINTS Malic enzyme signature 493 509 IPR001891 GO:0004470|GO:0004471
Gso11g3634 647 PANTHER MALIC ENZYME 12 647 - -
Gso11g3634 647 PANTHER MALIC ENZYME-RELATED 12 647 - -
Gso11g3634 647 Pfam Malic enzyme, N-terminal domain 172 353 IPR012301 GO:0004471
Gso11g3634 647 Pfam Malic enzyme, NAD binding domain 363 615 IPR012302 GO:0051287
Gso11g3634 647 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Gso11g3634 647 MobiDBLite consensus disorder prediction 33 55 - -
Gso11g3634 647 SMART malic_2 172 353 IPR012301 GO:0004471
Gso11g3634 647 CDD NAD_bind_1_malic_enz 363 641 - -
Gso11g3634 647 MobiDBLite consensus disorder prediction 33 53 - -
Gso11g3634 647 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 363 646 IPR036291 -
Gso11g3634 647 Gene3D - 106 360 IPR037062 GO:0004471
Gso11g3634 647 PIRSF ME 62 647 IPR001891 GO:0004470|GO:0004471
Gso11g3634 647 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 86 362 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3634 Gso-Chr11 52033855 52039569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3634 K00029 - gmx:100800844 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0177 15 1499817 1505542 Gso11g3634 11 52033855 52039569 GST
Gso11g3634 11 52033855 52039569 Gso8g1671 8 16358449 16364169 PCT
Gso8g1671 8 16358449 16364169 Gso11g3634 11 52033855 52039569 PCT