Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3411 ATGCAGACCCCAAAGACAAGAAGTAGTAGTAGCTCCTCTGAAGTGCCTCAGAAAGTGTCCCCTCGTGGTGGACGCCGACTCAGGCCTGCTACACTGGACACTACTGCATCTTCATTAAGCCAACCTAACAAAACATCAAAGGATAATACAAGTCCCAAACTCACCGACCGCAGATCACCCAGAAGCCCCGCTCCTGAGAGGAAGCGTCCTAGCAGAATATTCGAATTGGAATCTCAGAATTCTCAACTCAAAGAGGATTTGAAGGTGGTGAGGAACCAGCTCGGTGTGTCTGAATCATGCAAGAAGCAAGCTCAGCAAGATGCTGAAGAGTCCAAGAAGCAAGTAGCTTCCCTATCCTTGAAACTTGAAGATTCTCAACAGCAACTTGTGAAGTTCTCGGCTACAGAACAATCTCGTGTTGTTGAGCTCCAGAAAACCATAGAAGAGCATGACAAGACTTGGCAATCCGAGCTTAGGAATGCCCAACAGAAGCTCTCAGACAACACCGCTGCGCTTACCTCTGCCATCGACGAAATTCAGCAGCTCAAGGTTCAGCTTGAATTGGTAGCTAACTGTGAGAATGCGCACACGCAAATTGCGGAATCATCAGACGTGGAGCTGCTAAACTTGAAGGATAACTTGGCAGAATCTCTTTCTCTTGTGGAGAACATGAAAAACCAACTTAAAGATTCCAAAGAGTCAGCTCAGGCACAAGCTTTGGTCAATGAGACTTTGAGGCAACTTGAGGCTGCAAAAAGAACTGTTGAGTTTCTGAGAGCTGATGCTGCTAAAGCTGTCAATGGCTACAACTTTGCTGCTTTGGAGTTAGACCAATCTAGAGCACGGGTGAACTCACTAGAGGAACTAGTAAGCAAACTTGAGTTTGGCCTCATTAGTAACAAATGCAACGGTTCTATAAATTTTGCAGATGATAGTATCATGGAGATATTACAAAAGGGTGAGACAGATTCTAATCGCATTGAAGCACAAATTTACTCTTTGAGCTCTGCAATAGAGAGTGCTGAAACTAAGCACCAGGAAGAACAGATCGAGTGTTCTGTGAAGATTAGGAAAGCCTATGAGTTGATTGAACAGATAAAATCAGAATCAAGCAAGAGGGAATCTCAGCTAGAGGCTGAATTAAAAAGAAAGAATGCCGATATTGAAGAGTTGAAGGCTAACCTAATGGACAAGGAAACTGAGTTGCAGTGCATTGTGGAGGAGAATGAGAAGTTGAATTTGAAGCTTGAAAAAAGGATGTCATCACAAAGAGAACATGAACTTCAAAAGGAGCTTCGAAAACTAGATGAATGCGTGGCTGGATTGAAGGCCGACCTGATGGAAAAGGAAACAACGTTGCAAAGCATATCTGAAGAGAATGAAATGCTGAAGTTGGAGATCAGTAAGAGGTTTGCACATGGTGGTAAGGTGATGGAGGAAGTTGCTGCACAACTAGAGGCAGCTAAGGCTTCGGAACGCGAGGCGGTTATGAAGCTTGGTATTGTGATGGAAGATTCAGACAGAAGCAACCGAAAGGCGGCGAGGGTGGCCGAGCAACTGGAAGCATCTCAAGCAGCAAATTCAATAATAGAAGCTGAACTAAGAAGGTTGAAGATACAGTCTGATCAATGGAGAAAGGCTGCAGAGGCAGCTGCTGCTATGCTCTCAGCAGGGAACAATGGGAAACTTAGTGAGAGATCAATGTCTTTGGACAACAACTATAACTCTATAATGAACAAGTACTCACCTTTTTGTGAAGAGCTTGATGATGATGATTTTCAGACCAAGAAAAATGGCAACATGCTCAAGAAGATTGGGGTCTTGTGGAGGAAACCTAAAAAATAG 1845 0.4401 MQTPKTRSSSSSSEVPQKVSPRGGRRLRPATLDTTASSLSQPNKTSKDNTSPKLTDRRSPRSPAPERKRPSRIFELESQNSQLKEDLKVVRNQLGVSESCKKQAQQDAEESKKQVASLSLKLEDSQQQLVKFSATEQSRVVELQKTIEEHDKTWQSELRNAQQKLSDNTAALTSAIDEIQQLKVQLELVANCENAHTQIAESSDVELLNLKDNLAESLSLVENMKNQLKDSKESAQAQALVNETLRQLEAAKRTVEFLRADAAKAVNGYNFAALELDQSRARVNSLEELVSKLEFGLISNKCNGSINFADDSIMEILQKGETDSNRIEAQIYSLSSAIESAETKHQEEQIECSVKIRKAYELIEQIKSESSKRESQLEAELKRKNADIEELKANLMDKETELQCIVEENEKLNLKLEKRMSSQREHELQKELRKLDECVAGLKADLMEKETTLQSISEENEMLKLEISKRFAHGGKVMEEVAAQLEAAKASEREAVMKLGIVMEDSDRSNRKAARVAEQLEASQAANSIIEAELRRLKIQSDQWRKAAEAAAAMLSAGNNGKLSERSMSLDNNYNSIMNKYSPFCEELDDDDFQTKKNGNMLKKIGVLWRKPKK* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3411 614 Coils Coil 73 93 - -
Gso11g3411 614 MobiDBLite consensus disorder prediction 31 49 - -
Gso11g3411 614 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 614 - -
Gso11g3411 614 Coils Coil 101 128 - -
Gso11g3411 614 Coils Coil 520 540 - -
Gso11g3411 614 MobiDBLite consensus disorder prediction 1 79 - -
Gso11g3411 614 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 614 IPR029688 -
Gso11g3411 614 MobiDBLite consensus disorder prediction 1 18 - -
Gso11g3411 614 Coils Coil 207 261 - -
Gso11g3411 614 MobiDBLite consensus disorder prediction 50 79 - -
Gso11g3411 614 Coils Coil 374 415 - -
Gso11g3411 614 Coils Coil 269 289 - -
Gso11g3411 614 Coils Coil 439 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3411 Gso-Chr11 50011172 50015697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3411 - - gmx:100809009 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0389 15 3583869 3590611 Gso11g3411 11 50011172 50015697 GST
Gso11g3411 11 50011172 50015697 Gso12g0592 12 5354561 5361562 PCT
Gso11g3411 11 50011172 50015697 Gso11g1249 11 11511591 11518839 PCT
Gso12g0592 12 5354561 5361562 Gso11g3411 11 50011172 50015697 PCT
Gso11g1249 11 11511591 11518839 Gso11g3411 11 50011172 50015697 PCT