Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1249 ATGCAGACACCAAAGACAAGAAGTGGGTCCTCTGAAGTGCCTCAGAAGGTGTCTCCACGTGCCGTGCGCAAACTCAAGCCTACTACTCTGGACATCGACTCTGCATCTTCTTTAAGTCAGGCTACTAAATCATCAAAGGAAAGAAGCCCCAAAGTCACTGACCGCAGATCACCCAGAAGCCCAGTTGTTGAGAGGAAGCGCCCCAGCAAAATATCTGAGTTGGAATCTCAAATTTCTCAACTCCAAAATGACTTGAAGAAGGTAAAGGACCAGCTTATTTTGTCTGAATCATGCAAGAAGCAAGCTCAGCAAGAAGCTGAGGAGTCCAAGGAGCAACTACTAGCCCTATCTGCAAAACTTGAAGAGTCACAAAAACAAGTTCTGGATCTTTGTTCTACTGGAGAAGCTCGCGTTCTTGAGCTCCAGAATATCGTAGAAGAACGTGATATGGCATGCCAATCTGAGCTTGAGTCTTCCAAAAAGCAGCTCTCAGTTGAGTCTGCTGCCCTGGCCTCTGCAACGAACGAAATTCAGATGCTCAAGGCGCAACTTGAATTGGTAGCTAATTGTGAGAGTGTGCAATCTCAACACGCAGAATCAGCAGACATTGAGCTTCTTAACCTGAAGCAGAACTTGTCCGAAACGCTTTCTCTTGTGGATGCCTTGAAAAACCAACTAAGGGATTGCAAAGAATCTGAAGCTCAGGCCCAAGCATTGGTCAATGAAACTATGATGCAACTTGAGGCTGCAAAAGGAACTGTTGAGTTCCTAAGGGCTGATGTTGCGAAAGCTGTTGATGGCTACAACTCCATTGCTAAAGAGTTAGACCAATCTGAAGCACGGGTGAACTCACTAGAGGCATTTGTTAGCAATCTTGAGACAGACCCCATCAATAATAAATGCATCCTTTCAGAAAATGTTGCAGATGATCATAAATTTGAGTACCAACCTGAAATATTGAAACAGGGTGAGGATCCTAGTCAGCTGGAAGCAGAAGTTGTTTCTTTGAAGTCCGAGGTTGAACGATTGAGATCTGCTATAGAGACTGCTGAGATTAAATACCAAGAAGAACAGAATCGGAGCACGGTGCAGATCAGGAATGCCTACGAGTTAGTAGACCAGATAAAATCTGAATCATGTCAGAGGGAATGTGAGCTAGAGGCTGAGTTGAAAAAGAAAAAAGCTGATATTGAAGAGTTGAAGGCTAACCTAATGGACAAGGAAACTGAGTTGCAAGGCATTGTGGAGGAGAATGACAACCTGAACCTAAAGCTTCAAGAGAGCATGTCATCCAAAAACGAGCACGAACTAAAAAGGGAAATTAAAAGACTAGAAGAATGTGTGGCGGAACTGAAGGCAGATATGATGGACAAGGAGACAATGCTGCAAAGCATATCTGAAGAGAACGAAACGCTGAAATCGGAAATGAACAACTGCAGCAAAGCAAGGGAGGAAGTTGCTGCTGAAGTAGAGCAAGTGAGGGCAGCGGAACGCGAGGCTCTCATGAAACTCGGGATTGTGATGGAGGAGGCAGATAAGAGCAACAAGAAGGCTGCAAGAGTGGCTGAGCAGCTGGAGGCAACACAAGCCGCGAACTCAGAAATGGAAGCAGAACTGAGAAGACTGAAGGTGCAGTCTGATCAGTGGAGGAAGGCTGCAGAGGCAGCTGCTGTTATGATTTCAACAGGGAACAACAATGGGAGGCTCACAGAGAGAACTGTGTCTTTGGATAACAACAACTACAAGGGCTCACCCTATGCTGAAGACATGGATGATGACTTCCAGAGGAAGAAAAATGGCAACATGCTGAAGAAGATCGGGGTCTTGTGGAAGAAGCCTCAAAAATAG 1848 0.4529 MQTPKTRSGSSEVPQKVSPRAVRKLKPTTLDIDSASSLSQATKSSKERSPKVTDRRSPRSPVVERKRPSKISELESQISQLQNDLKKVKDQLILSESCKKQAQQEAEESKEQLLALSAKLEESQKQVLDLCSTGEARVLELQNIVEERDMACQSELESSKKQLSVESAALASATNEIQMLKAQLELVANCESVQSQHAESADIELLNLKQNLSETLSLVDALKNQLRDCKESEAQAQALVNETMMQLEAAKGTVEFLRADVAKAVDGYNSIAKELDQSEARVNSLEAFVSNLETDPINNKCILSENVADDHKFEYQPEILKQGEDPSQLEAEVVSLKSEVERLRSAIETAEIKYQEEQNRSTVQIRNAYELVDQIKSESCQRECELEAELKKKKADIEELKANLMDKETELQGIVEENDNLNLKLQESMSSKNEHELKREIKRLEECVAELKADMMDKETMLQSISEENETLKSEMNNCSKAREEVAAEVEQVRAAEREALMKLGIVMEEADKSNKKAARVAEQLEATQAANSEMEAELRRLKVQSDQWRKAAEAAAVMISTGNNNGRLTERTVSLDNNNYKGSPYAEDMDDDFQRKKNGNMLKKIGVLWKKPQK* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1249 615 MobiDBLite consensus disorder prediction 47 72 - -
Gso11g1249 615 Coils Coil 205 242 - -
Gso11g1249 615 MobiDBLite consensus disorder prediction 1 15 - -
Gso11g1249 615 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 615 IPR029688 -
Gso11g1249 615 Coils Coil 275 295 - -
Gso11g1249 615 Coils Coil 333 360 - -
Gso11g1249 615 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 615 - -
Gso11g1249 615 Coils Coil 508 552 - -
Gso11g1249 615 Coils Coil 71 91 - -
Gso11g1249 615 MobiDBLite consensus disorder prediction 30 46 - -
Gso11g1249 615 Coils Coil 99 126 - -
Gso11g1249 615 Coils Coil 434 499 - -
Gso11g1249 615 MobiDBLite consensus disorder prediction 1 76 - -
Gso11g1249 615 Coils Coil 387 424 - -
Gso11g1249 615 MobiDBLite consensus disorder prediction 569 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1249 Gso-Chr11 11511591 11518839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1249 - - gmx:100788449 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1249 11 11511591 11518839 Gso11g1249 11 11511591 11518839 ECH
Gso12g0592 12 5354561 5361562 Gso11g1249 11 11511591 11518839 GST
Gso15g0389 15 3583869 3590611 Gso11g1249 11 11511591 11518839 PCT
Gso11g3411 11 50011172 50015697 Gso11g1249 11 11511591 11518839 PCT
Gso11g1249 11 11511591 11518839 Gso15g0389 15 3583869 3590611 PCT
Gso11g1249 11 11511591 11518839 Gso11g3411 11 50011172 50015697 PCT