LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso11g1452	ATGGCATCAGCATTATCTTCTCTCTCCTCCACCTCTTCTTCCCTGTTACAGCACAGTTTCACCGGAAACTCGAAGGCTCCTCCCACTACTCAATTCCCCAACAAAAATGTACGCTTTTCGGTCTTCGCTCAAAAGAAGGCAAAGAAACTTCGAAAGATTATTTTGAAGGAAGATGTGGCTTATGTAGGAAAGCAAGGGCAACTTCTTGATGTGAAGGCTGGCTTTTTCAGAAATTACCTGCTTCCTATGGGAAAAGCACAACTTGTTACTCCACAGCTTCTCAAGGAAATGAAGATAGAAGAAGAAAGAATTGAGGCTGAGAAAAAACGGGTAAAAGAAGAGGCACAGCAACTTGCTCTAATTTTTGAAACTGTTGGGGCTTTCAAGGTGAAGCGTAAAGGTGGTAAAGGAAAACAAATTTTTGGAAGTGTCACTGCTCAAGATCTTGTTGACATAATCAAGGCACAACTTCAAAGGGAGGTGGACAAGAGAATTGTTGATCTTCCAGAGATCAGGGAAACAGGAGAATATATTGCAGAGTTAAAGCTTCACCCGGAAGTTACGGCTAGAGTGAGGGTGAATGTTTTTGCTAACTGA	597	0.4204	MASALSSLSSTSSSLLQHSFTGNSKAPPTTQFPNKNVRFSVFAQKKAKKLRKIILKEDVAYVGKQGQLLDVKAGFFRNYLLPMGKAQLVTPQLLKEMKIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAELKLHPEVTARVRVNVFAN*	199

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso11g1452	198	Gene3D	-	52	111	IPR036935	-
	Gso11g1452	198	PANTHER	50S RIBOSOMAL PROTEIN L9	1	198	IPR000244	GO:0003735\|GO:0005840\|GO:0006412
	Gso11g1452	198	Coils	Coil	94	121	-	-
	Gso11g1452	198	Hamap	50S ribosomal protein L9 [rplI].	51	198	IPR020594	GO:0003735\|GO:0005840\|GO:0006412
	Gso11g1452	198	ProSitePatterns	Ribosomal protein L9 signature.	63	90	IPR020070	-
	Gso11g1452	198	TIGRFAM	L9: ribosomal protein bL9	52	197	IPR020594	GO:0003735\|GO:0005840\|GO:0006412
	Gso11g1452	198	Gene3D	-	112	198	IPR036791	-
	Gso11g1452	198	PANTHER	50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC	1	198	-	-
	Gso11g1452	198	SUPERFAMILY	L9 N-domain-like	52	107	IPR009027	-
	Gso11g1452	198	SUPERFAMILY	Ribosomal protein L9 C-domain	110	197	IPR036791	-
	Gso11g1452	198	Pfam	Ribosomal protein L9, N-terminal domain	52	97	IPR020070	-
	Gso11g1452	198	Pfam	Ribosomal protein L9, C-terminal domain	113	196	IPR020069	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso11g1452	Gso-Chr11	16844009	16847261	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso11g1452	K02939		-	gmx:100500279	327.405

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso11g1452	11	16844009	16847261	Gso11g1452	11	16844009	16847261	ECH
	Gso12g0664	12	6485424	6488658	Gso11g1452	11	16844009	16847261	GST