Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1402 ATGGAATTTGGAAGCATAATCCACTTCCTTGAGGACAAGAATGTTTTGGTCATTGGTGCCGCTGGTTTCCTTGCCAAAATTTTTGTGGAGAAGATACTGAGAGTGCAACCAAATGTGAAGAAACTTTATCTTCTTCTGAGAGCCACAGATGCTGAATCTGCCTCTCAACGATTGCATAATGAGATTATCCAGAAGGACTTGTTTAGATTGTTGAAGGAAAATCTTGGTGCAAAGTTCAATACCTTTGTTTCAGAAAAGTTGACACTTGTGCCTGGGGACATTTCTCAAGAGGACTTCAACTTGAAAGACCCCATTCTACGGGAAGAAATTTGCAGTCAAACCCATTGTATTATCAATTTTGCTGCCACCACTAACTTTGATGAAAGATACGATGTTGCATTGGGTATAAATACATTAGGAGTTAAGCATGTTTTGAACTTCGCCAAAAGTTGTATTAAGCTGAAGGTGCTTGTCCATGTATCAACAGCATATGTATGTGGTGAGAGAGGAGGACTCATTATAGAGGATTCATGCCAATTGGGCGTGTCACTAAATGGAGTGCCCGGACTAGACATTGACATGGAAAAGAAAGCGGTGGAGGATAAGTTGTACCAACTTCAACAAGAGGGGGCTACAGAGGATGATATTAAAATGGCAATGAAGGACTTCGGTATGAAAAGAGCAACTATATATGGATGGCCAAACACGTATGTCTTTACAAAGGCAATGGGAGAAATGCTTATAGAAACTCTAAAGGAAAACGTGTCCGTTGTTATTGTACGTCCTACAATGGTTACCAGTACTTACAGAGAACCTTTTCCTGGGTGGGTCGAAGGAGTAAGGACCATTGATAGTTTAATTGTTGCTTATGGCAAAGGAAAATTAACATGCTTTCTTGCAGACATCAAGGCAACTTTTGACGTGATACCGGCAGACATGGTGGTGAATGCAATAATAAGTACCATGGTGGCGCATGCAAATAAGCCATGTGATAATATCATATATCATGTGGGCTCCTCTTTAGAAAATCCAGTTAGATACCACAATCTCCAAGACTATGGCTTTAGATATTTCAAGGCCAAACCATATGTAAACAAGGAAGGAAATTATGTCATGGTTCGCAAAGTTACAGTGTTAGACAGCATGGCTAGCTTTCAGAGATACATGTTCATTCGTTACTTCCTTCCATTAAAGGGACTAGAGCTAGCCAATGCTGCCTTTTGCCAATATTTTCAGAGGACGTATCTTGACATTAGAAGGAAGATCTATACAGTGATGCGGTTGGTTGACCTTTACAGGCCTTATTTGTTCTTCAATGGCGTTTTTGATAATATGAACACAAAAAAGTTGCGGATAGCGGCAAGAGAAAGTGGGGTAGAGATGGAGGAGTATTTGTTTTACTTTGATCCTAAAATGATTGATTGGGAGGACTACTTCATGAATATCCATATTCCTGGTATTGTCAAGTATGTCTTCAAGTGA 1482 0.3988 MEFGSIIHFLEDKNVLVIGAAGFLAKIFVEKILRVQPNVKKLYLLLRATDAESASQRLHNEIIQKDLFRLLKENLGAKFNTFVSEKLTLVPGDISQEDFNLKDPILREEICSQTHCIINFAATTNFDERYDVALGINTLGVKHVLNFAKSCIKLKVLVHVSTAYVCGERGGLIIEDSCQLGVSLNGVPGLDIDMEKKAVEDKLYQLQQEGATEDDIKMAMKDFGMKRATIYGWPNTYVFTKAMGEMLIETLKENVSVVIVRPTMVTSTYREPFPGWVEGVRTIDSLIVAYGKGKLTCFLADIKATFDVIPADMVVNAIISTMVAHANKPCDNIIYHVGSSLENPVRYHNLQDYGFRYFKAKPYVNKEGNYVMVRKVTVLDSMASFQRYMFIRYFLPLKGLELANAAFCQYFQRTYLDIRRKIYTVMRLVDLYRPYLFFNGVFDNMNTKKLRIAARESGVEMEEYLFYFDPKMIDWEDYFMNIHIPGIVKYVFK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1402 493 CDD FAR-N_SDR_e 13 362 - -
Gso11g1402 493 Pfam Male sterility protein 392 493 IPR033640 -
Gso11g1402 493 Pfam Male sterility protein 19 318 IPR013120 -
Gso11g1402 493 Gene3D - 8 378 - -
Gso11g1402 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 356 IPR036291 -
Gso11g1402 493 CDD FAR_C 391 492 IPR033640 -
Gso11g1402 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 492 IPR026055 GO:0080019
Gso11g1402 493 PANTHER FATTY ACYL-COA REDUCTASE 2 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1402 Gso-Chr11 16083415 16088396 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1402 113 492 Acyl Lipid Metabolism Gene Families AT4G33790 58.947 1.04e-168 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1402 K13356 - gmx:100788994 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1542 12 38866315 38879123 Gso11g1402 11 16083415 16088396 PCT
Gso11g3301 11 48830000 48837031 Gso11g1402 11 16083415 16088396 PCT
Gso11g1402 11 16083415 16088396 Gso12g1542 12 38866315 38879123 PCT
Gso11g1402 11 16083415 16088396 Gso11g3301 11 48830000 48837031 PCT