Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1151 ATGCATCTGGCTTCCCTCATAAATCCAACTTCTAATTTTCCATTACTCTCAAGCCGCACAACCACCACCTCTTTCATTTTCAACCATAGAAGAAAAAAATCACAGTCCAATTGCATTAGGAGCCACCAGTCCACAATACAGCAGAGGTGGACTCTTCAGGGCATGACAGCTCTCGTCACTGGTGGTACTCGCGGAATTGGGCACGCCATTGTGGAGGAATTGACGGGGTTTGGAGCCAGAGTGCATACCTGTGCCAGGAATGAACATGATCTCACCAAGTGCCTCAAGAATTGGAATGATTCCGGTTTTGATGTCACTGGCTCAGTTTGTGATGTCTCAGTTCCACACCAGAGGGAGGCACTCATGGAGTCTGTTTCCTCTCTCTTCCACGGGAAACTCAACATCCTTATAAACAATGTTGGTACAAACATTCGGAAACCAGTGACAGACTTCACAAGTGCAGAGTTTTCTACTCTTATTGATACGAATTTGGGATCCGTCTTTCATTTATGCCAACTTGCATATCCACTTCTGAAAGCATCGGGAATGGGAAGTGTTGTGTTTGTCTCATCTGTTTCTGGTTTTGTCTCACTCAAGTCAATGTCTGTTCAAGGAGCAACGAAAGGGGCAATTAATCAACTAACAAGAAATCTAGCTTGTGAGTGGGCAAAAGACAATATAAGGAGTAATGCAGTGGCACCTTGGTACATCAAAACTTCATTGGTAGAGCAGGTGCTCAGCAACAAAGATTATCTGGAAGAAGTGTACTCCAGAACTCCTCTTAGGCGCCTAGGAGATCCAGCAGAAGTCTCTTCTCTTGTTGCCTTTCTTTGCTTACCAGCATCATCATACATCACTGGCCAGATTATTTGTATTGATGGAGGAATGTCCGTGAATGGTTTCTACCCAACAACACAGTTCTAA 924 0.4437 MHLASLINPTSNFPLLSSRTTTTSFIFNHRRKKSQSNCIRSHQSTIQQRWTLQGMTALVTGGTRGIGHAIVEELTGFGARVHTCARNEHDLTKCLKNWNDSGFDVTGSVCDVSVPHQREALMESVSSLFHGKLNILINNVGTNIRKPVTDFTSAEFSTLIDTNLGSVFHLCQLAYPLLKASGMGSVVFVSSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIKTSLVEQVLSNKDYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICIDGGMSVNGFYPTTQF* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1151 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Gso11g1151 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 192 IPR002347 -
Gso11g1151 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 204 223 IPR002347 -
Gso11g1151 307 PRINTS Glucose/ribitol dehydrogenase family signature 56 73 IPR002347 -
Gso11g1151 307 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Gso11g1151 307 PRINTS Glucose/ribitol dehydrogenase family signature 178 194 IPR002347 -
Gso11g1151 307 PRINTS Glucose/ribitol dehydrogenase family signature 204 223 IPR002347 -
Gso11g1151 307 PRINTS Glucose/ribitol dehydrogenase family signature 225 242 IPR002347 -
Gso11g1151 307 PRINTS Glucose/ribitol dehydrogenase family signature 260 280 IPR002347 -
Gso11g1151 307 PANTHER TROPINONE REDUCTASE 30 305 IPR045000 GO:0016491
Gso11g1151 307 Pfam Enoyl-(Acyl carrier protein) reductase 63 297 - -
Gso11g1151 307 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 30 305 - -
Gso11g1151 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 299 IPR036291 -
Gso11g1151 307 Gene3D - 35 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1151 Gso-Chr11 10334684 10337762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1151 46 301 Miscellaneous Gene Families AT2G29290 62.500 7.30e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1151 K08081 - gmx:100799534 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1151 11 10334684 10337762 Gso11g1151 11 10334684 10337762 ECH
Gso12g0490 12 4347409 4352058 Gso11g1151 11 10334684 10337762 GST