LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso11g1135	ATGGTTCAGTACAATTTTAAGAAGATTACCGTGGTGCCAAATGGGAAGGATGTGGTCGACATTATCCTCTCTCGCACCCAGCGTCAGACACCAACCGTTGTGCACAAAGGATATGCGATTTCACGGCTGCGCCAATTCTACATGCGCAAAGTGAAGTATACTCAGCAGAATTTTCACGACAAGCTCTCCACCATAATCGACGAGTTCCCCCGGCTTGACGACATTCATCCATTCTACGGTGATCTCCTCCATGTGCTCTACAACAAGGACCATTACAAGCTTGCTCTTGGCCAAATCAACACTGCCAGGAATCTCATTGGTAAGATTGCCAAAGACTATGTCAAGTTATTGAAGTACGGTGACTCGCTTTACCGGTGCAAGTGTCTTAAGGTTGCTGCTCTTGGCCGCATGTGCACTGTGATCAAGAGGGTTGGCCCGAGTTTGGCTTATTTAGAACAGGTCAGACAGCACATGGCTAGGCTTCCCTCTATTGATCCAAATACGAGGACTGTTTTGATCTGTGGATATCCTAATGTTGGTAAGAGCTCGTTCATTAACAAGATTACCAGAGCTGATGTGGATGTGCAGCCCTATGCTTTCACTACCAAGTCTCTCTTTGTGGGTCATACTGATTATAAATACCTGAGGTACCAAGTAATTGATACGCCAGGGATTTTGGACAGGCCTTTTGAAGATCGTAATATTATTGAGATGTGCAGTATCACTGCTCTAGCACATTTGAGAGCTGCAATCTTGTTTTTCTTGGACGTCTCTGGATCTTGTGGTTACAGTATTGCTCAGCAGGCAGCGCTGTTTCACAGCATTAAGTCTTTGTTTATGAACAAGCCGTTGATTATAGTCTGCAACAAGACTGACTTGCAGCCACTGGAGGGGATATCAGAGGAAGACATGAAGTTGGTCAATGAGATGAAAGCTGAAGCCTTGAAGACTCTAGTTGGTCAAGGAGGTGAGCCTACAGACAATAACAGTGTATTGTTGACCATGAGCACTTTGACAGAAGAAGGGGTAATTGCTGTAAAAAATGCAGCATGTGAGAGGTTATTGGATCAGAGGGTGGAGATAAAGATGAAGTCAAAGAAAATTAACGACTGCTTGAATAGGTTTCATGTTGCAGTACCAAAGCCTCGTGACCAGAAGGAAAGGCCTCCATGTATTCCTCAAGCAGTTTTAGAAGCTAAAGCTAAGCAAGCTGCTGAGAAGGAAAAGAGAAAAACTGAAAAGGATCTGGAGGATGAGAATGGTGGGGCGGGTGTATACTCAATGAACTTGAGGAAGAATTACATTTTAGCCGATGATGAATGGAAAGAGGATGTGCTGCCAGAAATTTTGGATGGACACAATGTGTATGATTTCATTGATCCTGATATTCTGCATAGGGTTGAAGAGTTGGAAAGAGAAGAAGGGATGAGACAGGAAGAAGCTGAGGATGATGATTTTGAGATTGATGGAACTGAATTGACACCCGAGCAGCAAGCAGCTTTAGCTGAGATCAGGAAAAAGAAAAGCTTGCTCATCCAGCAGCATAGGATCAAAAAGAGCAATGCAGAGAATCGGCCAACTGTTCCAAGGAAGTTTGATAAGGACAAGCAGTTCACATCAGAAAGAATGGGAAGGCAACTGTCATCTTTGGGGCTTGATCCCAGTTTGGCAATTAAGAGAATGCACAGCAGATCTGTCTCTAGAGGTCGGAAAAGGGATAGATCGCCTGAAACAAGAAGTGCTGATGGTATGGATACTGATGGTGACACACCTAGCAAAAAACAGCGTCTGAGTAGATCACTGTCACGGTCCAGGTCAGTGTCACGCCCACCACATGAAGTTGTGCCTGGAGAAGGCTTCAAGGATTCTGCTCAAAAGGTCAAGGCAATCAAACTTGCAAAGAAATCTGTCAAGAAGAGAAACAAGGATGCCCGTCGTGGAGAAGCTGATAGAGTCATACCTAATCTGAAGCCCAAGCACTTGTTTTCTGGGAAGCGTTCCAATGGAAAAACTGAGAGACGCTAG	2025	0.4459	MVQYNFKKITVVPNGKDVVDIILSRTQRQTPTVVHKGYAISRLRQFYMRKVKYTQQNFHDKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVKLLKYGDSLYRCKCLKVAALGRMCTVIKRVGPSLAYLEQVRQHMARLPSIDPNTRTVLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDVSGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDLQPLEGISEEDMKLVNEMKAEALKTLVGQGGEPTDNNSVLLTMSTLTEEGVIAVKNAACERLLDQRVEIKMKSKKINDCLNRFHVAVPKPRDQKERPPCIPQAVLEAKAKQAAEKEKRKTEKDLEDENGGAGVYSMNLRKNYILADDEWKEDVLPEILDGHNVYDFIDPDILHRVEELEREEGMRQEEAEDDDFEIDGTELTPEQQAALAEIRKKKSLLIQQHRIKKSNAENRPTVPRKFDKDKQFTSERMGRQLSSLGLDPSLAIKRMHSRSVSRGRKRDRSPETRSADGMDTDGDTPSKKQRLSRSLSRSRSVSRPPHEVVPGEGFKDSAQKVKAIKLAKKSVKKRNKDARRGEADRVIPNLKPKHLFSGKRSNGKTERR*	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso11g1135	674	Pfam	NOG1 N-terminal helical domain	6	165	IPR041623	-
	Gso11g1135	674	PIRSF	NOG1	1	674	IPR024926	-
	Gso11g1135	674	Pfam	NOGCT (NUC087) domain	410	463	IPR012973	-
	Gso11g1135	674	Pfam	Nucleolar GTP-binding protein 1 (NOG1)	236	292	IPR010674	GO:0005525
	Gso11g1135	674	CDD	NOG	169	355	-	-
	Gso11g1135	674	ProSiteProfiles	OBG-type guanine nucleotide-binding (G) domain profile.	169	355	IPR031167	GO:0005525
	Gso11g1135	674	Gene3D	-	3	161	-	-
	Gso11g1135	674	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	48	312	IPR027417	-
	Gso11g1135	674	Coils	Coil	402	422	-	-
	Gso11g1135	674	PRINTS	GTP1/OBG GTP-binding protein family signature	171	191	IPR006073	GO:0005525
	Gso11g1135	674	PRINTS	GTP1/OBG GTP-binding protein family signature	192	210	IPR006073	GO:0005525
	Gso11g1135	674	PRINTS	GTP1/OBG GTP-binding protein family signature	219	234	IPR006073	GO:0005525
	Gso11g1135	674	PANTHER	NUCLEOLAR GTP-BINDING PROTEIN 1	1	674	-	-
	Gso11g1135	674	PANTHER	NUCLEOLAR GTP-BINDING PROTEIN 1	1	674	-	-
	Gso11g1135	674	MobiDBLite	consensus disorder prediction	570	596	-	-
	Gso11g1135	674	Gene3D	-	162	373	IPR027417	-
	Gso11g1135	674	MobiDBLite	consensus disorder prediction	518	541	-	-
	Gso11g1135	674	MobiDBLite	consensus disorder prediction	515	674	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso11g1135	Gso-Chr11	10224814	10227713	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso11g1135	K06943		-	gmx:100795311	1274.61

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso11g1135	11	10224814	10227713	Gso11g1135	11	10224814	10227713	ECH
	Gso12g0477	12	4252261	4255500	Gso11g1135	11	10224814	10227713	GST