Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1107 ATGGCATTCAAGGGCTATCTATACATTCTCATTGGTGTCTTCACTCTCGTTATAAGTTCCTCCGTTAATATCACACAAGCAGTTGCACCTTCTCTAAATCGGACCAGTTTTCCGCCAGGTTTCATCTTTGGCACCGCCTCCTCCGCCTACCAGTACGAAGGTGCTGCAAATGAAGGAGGCAGAGGACCAAGTACATGGGATGCCTATTCTCATAAATATCCAGAAAAAATATCGGATAGAAGCAATGGAGATGTAGCAGTTGATCAATATCATCGCTATAAGGAAGATGTTGGGATCATGAAGTATATGAACACTGATGCTTACAGATTCTCCATCTCTTGGTCAAGGATATTGCCAAAAGGAAAAATAAGCGCAGGTATAAACCAAGAAGGAATCAAATATTACAACAATCTCATCAACGAGCTACTGGCAAATGATCTTCTGCCATTTGTGACCCTTTTTCATTGGGATCTTCCCCAAGCCTTACAAGATGACTACGGTGGCTTCTTAAGCCCTCATATTATAAATGATTTCCAAGATTACGCTAAGCTATGCTTCAAGGAATTTGGAGATAGAGTGAAGCATTGGATTACTTTTAATGAACCATGGAGTTACAGTATGGGTTCAGAGCCCTACCTGAGCTCTCACTACCAACTACTGGCTCATGCAGCTGCTGTCAAAATTTATAAAACCAATTATCAGGCATCTCAAAACGGTTTGATAGGCATCACCTTAAATTGTCACTGGTTTATTCCATTCTCAAATGACACATTAGATCATCAAGCTGCCCTACGCGCTCTTGATTTCATGTTTGGATGGTTTATGCAACCACTTACAACAGGAAATTATCCAGAAACCATGCAGTCTTTGCTGGGAAGTCGATTACCAAACTTCACAGAAGAGCAATCCAAGCTACTTATTGGCTCATTTGATTTTGTTGGACTCAATTACTACACCACTAATTATGCTGCCCATATATTCCAAACAATTAATAACACAAGCAATACTAGCTATTTCCAAGATACTCACATCAACTTTACAACTGAACGTAATGGGACACCCATTGGACCAAGGGCTGCTTCATCTTGGCTTTATGTTTATCCAAGGGGACTTCGAGAACTATTGTTGTACATAAAGATGAAGTATAACAACCCTGTAATTTACATAACAGAAAATGGTATGGACGAGTCCAATGATCCAACACTATCCCTTGAAGAGGCACTCATGGATACTTGCAGAATTGACTACTTCTATCGTCATCTTTATTATATTCTAATTGCAATCAAGGATGGGGTGAAAGTACAAGGATATTTTGCATGGTCACTTTTGGACAACTTCGAATGGAGTGCTGGCTACACCTTGCGTTTTGGAATTAACTTCGTCGATTACAAGGATAATTTAAAAAGACACCAAAAGCTCTCTGCCCATTGGTTTAGGAATTTTCTTCAAAAATACTAG 1458 0.3971 MAFKGYLYILIGVFTLVISSSVNITQAVAPSLNRTSFPPGFIFGTASSAYQYEGAANEGGRGPSTWDAYSHKYPEKISDRSNGDVAVDQYHRYKEDVGIMKYMNTDAYRFSISWSRILPKGKISAGINQEGIKYYNNLINELLANDLLPFVTLFHWDLPQALQDDYGGFLSPHIINDFQDYAKLCFKEFGDRVKHWITFNEPWSYSMGSEPYLSSHYQLLAHAAAVKIYKTNYQASQNGLIGITLNCHWFIPFSNDTLDHQAALRALDFMFGWFMQPLTTGNYPETMQSLLGSRLPNFTEEQSKLLIGSFDFVGLNYYTTNYAAHIFQTINNTSNTSYFQDTHINFTTERNGTPIGPRAASSWLYVYPRGLRELLLYIKMKYNNPVIYITENGMDESNDPTLSLEEALMDTCRIDYFYRHLYYILIAIKDGVKVQGYFAWSLLDNFEWSAGYTLRFGINFVDYKDNLKRHQKLSAHWFRNFLQKY* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1107 485 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 41 55 IPR033132 -
Gso11g1107 485 PRINTS Glycosyl hydrolase family 1 signature 309 323 IPR001360 GO:0004553|GO:0005975
Gso11g1107 485 PRINTS Glycosyl hydrolase family 1 signature 387 395 IPR001360 GO:0004553|GO:0005975
Gso11g1107 485 PRINTS Glycosyl hydrolase family 1 signature 410 421 IPR001360 GO:0004553|GO:0005975
Gso11g1107 485 PRINTS Glycosyl hydrolase family 1 signature 431 448 IPR001360 GO:0004553|GO:0005975
Gso11g1107 485 PRINTS Glycosyl hydrolase family 1 signature 455 467 IPR001360 GO:0004553|GO:0005975
Gso11g1107 485 Gene3D Glycosidases 17 484 - -
Gso11g1107 485 Pfam Glycosyl hydrolase family 1 35 483 IPR001360 GO:0004553|GO:0005975
Gso11g1107 485 PANTHER GLYCOSYL HYDROLASE 3 484 IPR001360 GO:0004553|GO:0005975
Gso11g1107 485 SUPERFAMILY (Trans)glycosidases 31 483 IPR017853 -
Gso11g1107 485 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 3 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1107 Gso-Chr11 9914226 9918579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1107 6 484 Glycoside Hydrolase AT5G44640 49.802 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1107 - K01188 gmx:100785608 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0453 12 3982877 3987770 Gso11g1107 11 9914226 9918579 GST