Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0984 ATGGTTGTCCTTGCTGCATCCATTGTGAGCAAATCTGGCAAAGTTCTAGTTTCTAGACAGTTTGTGGACATGTCTCGTATCAGAATTGAGGGTCTTCTAGCAGCATTTCCCAAGTTAATAGGCACTGGAAAGCAACACACATATGTTGAGACGGAGAATGTGCGCTATGTTTACCAGCCAATGGAAGCACTATACCTGCTTCTTGTAACAAACAAACATAGCAACATACTGGAAGATTTGACAACTCTGAGACTTCTCTCCAAACTTGTTCCTGAATATTCTTACTCCCTTGATGAAGAGGATATTTGCCAAAATGCATTTGAGTTGATTTTTGCATTTGATGAAGTCATCTCTCTTGGGCATGCGGAAAATGTGTCTGTTGCACAAGTTAAGCAATACTGTGAAATGGAGAGTCATGAAGAGAAACTGCACAAGCTGGTTATGCAGAGCAAAATCAATGATACTAAGGATGTTATGAAGCGGAAAGCTAATGAGATTGATAAAAGCAAGATTGAAAAGAACAGAGGTGATAAAGGGGGATTTGGTCCTTTACAGTCACTAGGCTCTGGAAAAATTGAAAATAGCTTTAGTGATTTGAGCATAACTAGCAGCGGACCTGGTTTTGGAAGTGGCTCTGGTTTTGGATTGAGTTCTGATGTTGGTTCCTTTTCTACCAAGTCTAAAGGTGGTCCAACTTCATCTGCCACTGCTCCACCAAAAGGTCTTGGAATGAAGCTTGGTAAATCTCAAAGGACAAATCAGTTTTTGGAATCATTGAAAGCAGAAGGTGAGGTCATTCTTGAACATGTTCAACCAAAACTTGCTCAGGCAGCTGCCCCACCATCTACAGATCCCATTTCTTTAGCTGTTGAAGAGAAACTAAATGTGACACTAAAACGAGATGGTGGAGTCAGTAATTTTGATGTTCAAGGCACATTGTCTCTCCAAATTCTTGACAAAGAGGATGGACATATTCAAGTTCAGGTCCAAACTGGGGAGAATCAAGCCATCATTTTCAAGACACACCCTAACATGAATAAAGAATTATTTGCCAATGAAAATGTACTAGGTCTAAAGGATCCCAATAGGCCTTTCCCCACGGGTCAAGCTGGTGGTTCTGAAGGTGTTGGTCTTTTAAAGTGGCGAATGCAAAGCACTGATGAGTCAATGGTGCCTCTGACAATCAACTGCTGGCCCTCTTCTTCTGGAAATGAAACTTATGTCAGCATTGAGTATGAGGCTTCATCATTGTTTGATTTGCGGAATGTTGTGATCTCAGTACCTCTTCCAGCTCTTCGAGATGCACCATCTGTTAGACAGATTGATGGGGAATGGAGGTATGACTCAAGGAATTCCTTTTTGGAGTGGTCTGTCCTTCTGATTGATAATTCAAACCGCAGTGGGTCAATGGAATTTGTTGTTCCACAAGCCGAATCATCAGCATTCTTCCCCATTTCAGTTCGTTTTATAGCAACTGAAACATTTAGTGACCTGAAGGTCACCAGCATCATACCGCTAAATGGGGGTAATCCTCCTAAGTATTCTCAGAGAACACAGTTGATCACAGAAAACTACCAAATTGTGTGA 1587 0.414 MVVLAASIVSKSGKVLVSRQFVDMSRIRIEGLLAAFPKLIGTGKQHTYVETENVRYVYQPMEALYLLLVTNKHSNILEDLTTLRLLSKLVPEYSYSLDEEDICQNAFELIFAFDEVISLGHAENVSVAQVKQYCEMESHEEKLHKLVMQSKINDTKDVMKRKANEIDKSKIEKNRGDKGGFGPLQSLGSGKIENSFSDLSITSSGPGFGSGSGFGLSSDVGSFSTKSKGGPTSSATAPPKGLGMKLGKSQRTNQFLESLKAEGEVILEHVQPKLAQAAAPPSTDPISLAVEEKLNVTLKRDGGVSNFDVQGTLSLQILDKEDGHIQVQVQTGENQAIIFKTHPNMNKELFANENVLGLKDPNRPFPTGQAGGSEGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVSIEYEASSLFDLRNVVISVPLPALRDAPSVRQIDGEWRYDSRNSFLEWSVLLIDNSNRSGSMEFVVPQAESSAFFPISVRFIATETFSDLKVTSIIPLNGGNPPKYSQRTQLITENYQIV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0984 528 Gene3D - 3 141 - -
Gso11g0984 528 MobiDBLite consensus disorder prediction 163 186 - -
Gso11g0984 528 MobiDBLite consensus disorder prediction 222 248 - -
Gso11g0984 528 PANTHER S-ACYLTRANSFERASE 1 527 - -
Gso11g0984 528 Pfam Clathrin adaptor complex small chain 8 133 IPR022775 -
Gso11g0984 528 Pfam Adaptor complexes medium subunit family 282 510 IPR028565 -
Gso11g0984 528 CDD Delta_COP_N 4 133 - -
Gso11g0984 528 Gene3D Mu homology domain, subdomain B 286 507 - -
Gso11g0984 528 MobiDBLite consensus disorder prediction 163 177 - -
Gso11g0984 528 ProSiteProfiles Mu homology domain (MHD) profile. 283 528 IPR028565 -
Gso11g0984 528 SUPERFAMILY SNARE-like 5 142 IPR011012 -
Gso11g0984 528 Gene3D Mu homology domain, subdomain B 391 490 - -
Gso11g0984 528 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 283 527 IPR036168 -
Gso11g0984 528 PANTHER COATOMER SUBUNIT DELTA 1 527 IPR027059 GO:0006890|GO:0030126
Gso11g0984 528 CDD AP_delta-COPI_MHD 284 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0984 Gso-Chr11 8775687 8782946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0984 K20471 - gmx:100785260 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0335 12 2963096 2970368 Gso11g0984 11 8775687 8782946 GST