Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0981 ATGCTCGTATTGTTTGAAACACCCGCGGGTTTTGCCCTGTTTAAAGTGCTGGATGAAGGCAAGCTTTCTAAAGTTGAGGACTTGTGGAAGAACTTTTCCAGTGCAGATACTGCTAGACAGGTGGTCAAGTTGAAAGCATTTTCTAAATTTGAGAACACTTCAGAAGCTCTAGAGGCAGCTACTTTACTTATTGATGGAAAAGCTAGCAAGGGTCTCCGCAAGTTCCTGCGTGTTCATTGTGAAAATGAAACACTAGGTGTGGCAGATTCAAAGCTTGGGAATGTGATCAAGGAGAAATTGAAAATCGACTGTATTCACAACAATGCAGTTATGGAGTTGATGAGAGGTGTTAGAAATCAGTTAACTGAACTCATATCTGGTCTAGCTGTTCAAGACATGGCCCCAATGAGTTTGGGTTTATCTCACAGCTTATCCAGATACAAATTGAAGTTTAGTGCAGAGAAGGTGGATACCATGATTGTCCAGGCCATTGGTTTACTAGATGATCTTGATAAAGAGTTGAATACCTATGCCATGAGGGTTCGAGAATGGTATGGTTGGCATTTTCCTGAGCTTACTAAAATAATACAGGATAACATCCTATATGCCAGGGCAGTCAAGTTGATGGGTGATCGTGTTAATGCAGCTAGCCTGGATTTCTCTGAGATTTTGCCAGAGGAAGTTGAGGCAGAGCTGAAGGAGGCATCTGTGATATCTATGGGAACTGAAATTGGTGAGCTTGATTTGGCAAATATTCGAGAACTCTGTGACCAGGTTTTGTCTCTCTCGGAATACAGGGCGCAACTCTATGATTATCTGAAGAGTAGAATGAACACCATTGCACCCAATTTGACTGCAATGGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGTGGTAGCTTATTAAATCTTGCAAAGCAGCCTGGTAGTACTGTGCAAATTCTTGGTGCTGAGAAGGCTCTCTTTAGGGCACTGAAGACTAAGCATGCTACTCCCAAGTATGGTCTTATATACCATGCTTCCTTGATTGGTCAGGCAGCTCCAAAGTTCAAGGGGAAAATTTCTCGGTCACTTGCTGCAAAGACGGCATTAGCTATTAGGTGTGATGCTCTTGGAGATGGCCAAGATAACACCATGGGATTGGAGAACAGAGCTAAGCTTGAAGCACGATTGAGGAACCTTGAAGGCAAAGAGTTGGGTCGTTTTGCTGGTTCTGCCAAGGGAAAGCCCAAGATAGAAGCATATGACAAGGACCGAAAGAAAGGAGCTGGAGGACTGATAACCCCAGCCAAGACATATAATCCTTCAGCCGATTCAGTTATCGGGCAAATGGTTGATTCTGCTATTGATGAAGATGCACAAGAGCCTTCTGTTGCTGATAAAAAGAAAGAAAAGAAGGACAAGAAGAAAAAGAAGGACAAAAAGGAAGAGGATGCAACTGTGCAAGCTGATGGTGAGGAACCAGAACCTGTAGTAGTGAAAAAAGATAAGAAGAAGAAAAGGAAGGAAACTGAGAGTGCTGAGTTGCAGAATGGGAATGACGATAATGCAGGAGAGAAGAAGAAAAAGAGAAAGAAGCAGGGAGAGCAGGAAGAATCTCCTGAAATGCCAAGCAAGAAGAAAGGCAAAAAAAAGAAAAGTGAGGACTAA 1656 0.4318 MLVLFETPAGFALFKVLDEGKLSKVEDLWKNFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCENETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSAEKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNILYARAVKLMGDRVNAASLDFSEILPEEVEAELKEASVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPSADSVIGQMVDSAIDEDAQEPSVADKKKEKKDKKKKKDKKEEDATVQADGEEPEPVVVKKDKKKKRKETESAELQNGNDDNAGEKKKKRKKQGEQEESPEMPSKKKGKKKKSED* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0981 551 Gene3D Nop domain 285 397 IPR042239 -
Gso11g0981 551 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Gso11g0981 551 PANTHER NUCLEOLAR PROTEIN 58 1 549 - -
Gso11g0981 551 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Gso11g0981 551 MobiDBLite consensus disorder prediction 490 551 - -
Gso11g0981 551 MobiDBLite consensus disorder prediction 452 551 - -
Gso11g0981 551 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 549 IPR045056 GO:0030515|GO:0031428|GO:0032040
Gso11g0981 551 SMART NOSIC_2 159 211 IPR012976 -
Gso11g0981 551 Gene3D - 129 284 - -
Gso11g0981 551 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Gso11g0981 551 SUPERFAMILY Nop domain 153 397 IPR036070 -
Gso11g0981 551 Coils Coil 460 480 - -
Gso11g0981 551 MobiDBLite consensus disorder prediction 412 426 - -
Gso11g0981 551 MobiDBLite consensus disorder prediction 407 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0981 Gso-Chr11 8758943 8763244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0981 K14565 - gmx:100784721 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0332 12 2943885 2948800 Gso11g0981 11 8758943 8763244 GST