Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0879 ATGATTCTCCAACACGCTTCTCCCATCTCTCACTTCCACTTCTCTCCACTCTCCTCTCTCTGCCCCGGTAACAGTAACACCCCATTCCCCTTCTCCAGAAGAAGGCGAAAGCGCTTATTCGCCAATTCCGGCTCCCGCAAATTCCGCAGAAAATGCACCGTCCGCTTCTGCGCCGTTCCCTCCTCCGACAACAACCACCCAAACTGGAACGCCGATTTCGCCAATTCCGCGCGCAGAACCGCCACAACCTTCGTTCTCAAACGAATTTCCAACAACAACAACAACAACAACAACAACAACAACAACGATAACGATGTTATCGTTACCGAATTACAAGCACCACCGCCATCGGTTCAATTAGGTTCAAACTTCACCGGTTTCAGCGAGGATCCTATCGTGGATAAGCTGAGGACGCAGCTAGGGGTGATACACCCGATTCCCTCCCCTCCGATTAACCGCAACGTCATCGGCCTGTTCGTCTTCTTCTTCTTCGTCGGCGTCGTGTTCGACAAGCTGTGGACTTGGCGGCGGCGGCGGAGCAAGAACAACAGCGGCGGCGGCGAGGACGGGCTTGGCGTGTGGCCGCAGGTGCCAACGAGCTTCTCGCTGCTTCTGGAGAAGGATTTGCAGAGGAAGGAGTCGGTGGAGTGGGTGAACATGGTGTTGGGGAAGCTGTGGAAGGTGTATAGAGGAGGAATTGAGAACTGGATCATAGGGCTGCTTCAGCCTGTCATTGATAATCTCAAGAAGCCTGATTACGTGCAGAGGGTTGAAATTAAGCAGTTCTCGTTAGGGGATGAACCCTTGTCTGTTAGAAACGTTGAGCGCAGGACTTCTCGCAGAGTCAACGATTTGCAGTACCAGATAGGCCTTAGGTATACAGGTGGTGCTCGCATGCTGTTAATGCTTTCTCTGAAATTTGGCATCATTCCAATTGTTGTACCCGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTAAGGTTAATACCAACAGAGCCTTGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTCCCAAAGATCAAGTTTGAATTGTCTCTATTCCGTCTGTTCAATTTAATGGCTATTCCAGTTCTCTCGATGTTTTTGACTAAACTTCTCACTGAAGATTTACCTAAACTATTTGTACGCCCAAAGAAAATAGTTTTAGATTTCCAAAAGGGAAAAGCTGTTGGTCCAGTTGCTGTTGGTGTTAAATCTGGAGAAACGCAAGAAGGAAACAAGGATTCTGTGGGTGAACTATCTGTTACTCTGGTGGATGCTCGAAAGCTTTCTTATATTTTTTACGGCAAGACAGATCCTTATGTTATTCTTAGCCTTGGAAATCAAGTTATACGCAGCAAAAAGAACAGTCAAACTACTGTAATTGGACCCCCTGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTTTCCAACCCTAGAAAGCAGAAGTTATTCATCCAAGTAAAGGACGTTCTAGGATTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTAGGATCTCTCAAAGACACTGTTCCAACAGACAGAATTGTGGTTTTACAAGGAGGTTGGGGATTTTTAGGAAAGCGCTCTTCTGGGGAGATATTACTTCGGCTAACATATAAAGCATATGTGGAGGATGAGGAAGATGATAAAACTGAGGTGTATGCCATTTATACTGACGTTTCTGATGATGAGTTGTCTGATTCAGAAGTAAATGGTACTAATGAGAAGGATGAAAGAGATTCTGCGTATGAAACAGATAAGGAGTCATTTATGGATGTTTTGGCAGCATTAATTGTTAGCGAAGAATTTCAGGGGATAGTAGCATCTGAAACAGGGTTTAGCAAAGTTTTGGATAGTGGCTCAAATGCTGGACCTAGAGTGTCAAAATCTCAAGTTCCCAATGTTGAACCAATTCCTTCTAGTTCTGATAATTCCGAAGGTTTTGGAGGGTCAGCTTTACTTTGGCTTGCTGTGATTACTAGCATATCACTACTAATTGCTCTCAACGTTGGGGGATCCAGTCTCTTCAATCCCTAA 2070 0.4522 MILQHASPISHFHFSPLSSLCPGNSNTPFPFSRRRRKRLFANSGSRKFRRKCTVRFCAVPSSDNNHPNWNADFANSARRTATTFVLKRISNNNNNNNNNNNNDNDVIVTELQAPPPSVQLGSNFTGFSEDPIVDKLRTQLGVIHPIPSPPINRNVIGLFVFFFFVGVVFDKLWTWRRRRSKNNSGGGEDGLGVWPQVPTSFSLLLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVQRVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSLFRLFNLMAIPVLSMFLTKLLTEDLPKLFVRPKKIVLDFQKGKAVGPVAVGVKSGETQEGNKDSVGELSVTLVDARKLSYIFYGKTDPYVILSLGNQVIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKLFIQVKDVLGFADLTIGTGEVDLGSLKDTVPTDRIVVLQGGWGFLGKRSSGEILLRLTYKAYVEDEEDDKTEVYAIYTDVSDDELSDSEVNGTNEKDERDSAYETDKESFMDVLAALIVSEEFQGIVASETGFSKVLDSGSNAGPRVSKSQVPNVEPIPSSSDNSEGFGGSALLWLAVITSISLLIALNVGGSSLFNP* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0879 689 Gene3D C2 domain 409 553 IPR035892 -
Gso11g0879 689 CDD C2 426 520 - -
Gso11g0879 689 ProSiteProfiles C2 domain profile. 411 527 IPR000008 -
Gso11g0879 689 Pfam C2 domain 424 520 IPR000008 -
Gso11g0879 689 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 28 689 - -
Gso11g0879 689 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 211 398 IPR031468 GO:0008289
Gso11g0879 689 SMART C2_3c 425 526 IPR000008 -
Gso11g0879 689 MobiDBLite consensus disorder prediction 580 595 - -
Gso11g0879 689 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 424 552 IPR035892 -
Gso11g0879 689 MobiDBLite consensus disorder prediction 631 656 - -
Gso11g0879 689 MobiDBLite consensus disorder prediction 575 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0879 Gso-Chr11 7888567 7897002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0879 - - gmx:100817508 1319.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0239 12 2115129 2122163 Gso11g0879 11 7888567 7897002 GST