Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0867 ATGGCGAATGGTGAGGGAAGCGACATTGACGAAGTGAACTATGAAGAGGAAGAAAACACAGCACAGGAGGAAGATGACAATGTCATGGAAGAAGAAGAAGACGAAGAAGATGAGTACACTTTCAGGTTCAAAAACGGGATGAACCCTTTGGACTTTGTTGATGACAATGATGATTCTGGCATTCAACCCTACCAGCGATTCGTGCGTCTTGAACGGGAAGCCCTTGCTGATAAAAAGCGAAAAGCAATTGAACAATGCCATAGTGAAGAACCACCTTCTAAGATGGCTAGGGAAGGTGATGTTTCTGGGGCAAAGATAGCTGAGATAATGGAAGCAATGGATTATTATGGTGTGCGCAAGAGATCGAGAAAGCCTAAGAAGAGAGGCAGGCGAAAAGGATCAAAGAATAAAGATGACCCTAAGCTAACACAGATGCTGGGTGATGCCACGTTTCACTATGCACGTGGCGATTATGACCAGGCTAAAGCTGTGTTGCGTGAAGTTATTAGGCTGGCACCAAATTTGCATGAGTCGTATCACACCCTTGGACTTGTCTATACTTCACTCCAGGATTATAAAAGAGCTATGGCCTTATACTTGATTGCTGCTCATTTGGATGCAAAAGAGTCATCTCTTTGGAAAACGATTTTTACCTGGTCCATAGAACAAGGTTATGTTGATCAAGCCGGTTATTGTCTTTTAAAAGCAATAAAAGCAGATCCCAAAGATGTTACTCTTAGATGTCATCTTGCAAGGCTTTATGCTGAACTTGGACATTATCAAAAAGCTGCTGTTACATATGAGCAAGTACATAAACTATGTTGTGAGAATATTGATGCACTGAAAGCAGCAGCTAAGTTCTACAAAAAATGTGGTCAAGTTGAATACTCTGTTCGTATTCTTGAAGACTATATTAAGAGTCAACCGGATGTAGCAAATGCAAGTGTAGTTGATCTGCTGGGTACCATATTGATGGAAACTAAGGCACATGATAGAGCTCTGCAGCATATTGAACATGCTCAAGCAGTAAATGCGAGGAAAGAATTGCCTTTGAATTTGAAAATTAAGGCCGGAATTTGCCATGCTCATCTTGGAAACCTAGAGATGGCTCAGGTTCTCTTTAATGATTTGAAACCAGAGAATGCAAGCAAGCATATTGACTTGGTTACTGGGGTTGCAGACTCATTAATGGGTCTTGAACATTATAATCCTGCATTGAATTATTATTTGATGTTGGAAGGAAATGTTGAAAAAGAAAATGGTCTTCTATATCTGAAAATTGCTAGGTGTTATATGTCCTTGAAAGAAAGGTCACAAGCAATTCTCTTTTATTCCAAAGCTCTTGAAACACTACAAGATGATGTTGATGCACGCATAACTCTAGCTTCACTTCTGCTTGAAGAGGGAAAAGAAGATGAAGCCATATTCTTGCTGTCTCCTCCAAAGGATTCTGATTTTGGTGAAGCACCTTCTGGAAAGTCAAATAGATGGTGGTTTGATATAAGAATAAAACTGAAGCTCTGCAACATTTATTGGAATAGAGGGACGCTTGATGATTTTGTGGATACAATTTTCCCTTTGATTCGTGAATCATTGTATGTTGCAACTTGTCGACAGAAGGGTAAATCAAAAAAGCGTCTCTCCAAAAGAGATCTGGTTGAAAGGGTTAGGGTTCTGGATGGTCCGGAAAAGGATAATGTATTTCGGGGATTTAGACCAGTTGCTGCACCATCTGACCTGTTGAAAGCTTCCAGGGCAAAAAAGTTGCTCCAGAAGAAGGCAATTGAAAAGGAGAAAAGAAAAGCTGAGGCACTGGCCTCTGGAATTGACTGGCTAAGTGATGATTCAGATGATGAGCCTCAGAAAGAAAACAGAGAACCTCCCTTGTGTAATCTTCTCAAAGATGAAGAACATCACCAGCTAATAATTGATTTGTGCAAGGCATTAGCATCCTTGCAAAGGTATTGGGAAGCACTGGAGATTATTAATCTCTTTCTAAGATTGGCCCATACATCTCTGTCTACTGAAAAAAAAGAGGAGCTTCGATCTCTTGGAGCTCAAATGGCATATAACACCACAGATCCGAAACATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCACACAGTGTTGCAGCTTGGAATTGCTACTACAAGGTTATCTCAAGATTGGAAAACCGAGATACAAGACATTACAAATTTGTACGTGGTATGCAAGGAAAGTTTGTGGATTGTGTGCCTCCTATCCTTATTTCTGGGCATCAGTTTACCATATGTAGCCATCATCAAGATGCAGCAAGGAAATACCTTGAAGCTTATAAACTATTGCCAGAGAATCCTTTGGTTAATCTTTGTGTTGGAACAGCCTTGATCAACTTAGCATTGGGTTTAAGACTTCAAAATAAGCATCAATGTGTTGTACAAGGTTTAGCATTCCTCTACAATAATTTGAGAATCTGCGAGAACAGCCAGGAATCCTTGTACAACATAGCTCGGGCATTCCATCATGTTGGACTTGTAACTCTGGCGGTTATTTATTATGAGAAAGTGATTGCTATGTGCGAGAGAGACTATCCAATTCCAAAACTTCCCAATGAAAATTCAGATATCATCGAAACTCATAAACCTGGTTACTGTGACCTTCGCAGAGAGGCAGCTTACAATTTGCATTTAATCTACAAAAAAAGTGGTGCTCTTGATCTTGCTAGGCAAGTTCTCAGAGATTATTGTACCTTGTGA 2745 0.4004 MANGEGSDIDEVNYEEEENTAQEEDDNVMEEEEDEEDEYTFRFKNGMNPLDFVDDNDDSGIQPYQRFVRLEREALADKKRKAIEQCHSEEPPSKMAREGDVSGAKIAEIMEAMDYYGVRKRSRKPKKRGRRKGSKNKDDPKLTQMLGDATFHYARGDYDQAKAVLREVIRLAPNLHESYHTLGLVYTSLQDYKRAMALYLIAAHLDAKESSLWKTIFTWSIEQGYVDQAGYCLLKAIKADPKDVTLRCHLARLYAELGHYQKAAVTYEQVHKLCCENIDALKAAAKFYKKCGQVEYSVRILEDYIKSQPDVANASVVDLLGTILMETKAHDRALQHIEHAQAVNARKELPLNLKIKAGICHAHLGNLEMAQVLFNDLKPENASKHIDLVTGVADSLMGLEHYNPALNYYLMLEGNVEKENGLLYLKIARCYMSLKERSQAILFYSKALETLQDDVDARITLASLLLEEGKEDEAIFLLSPPKDSDFGEAPSGKSNRWWFDIRIKLKLCNIYWNRGTLDDFVDTIFPLIRESLYVATCRQKGKSKKRLSKRDLVERVRVLDGPEKDNVFRGFRPVAAPSDLLKASRAKKLLQKKAIEKEKRKAEALASGIDWLSDDSDDEPQKENREPPLCNLLKDEEHHQLIIDLCKALASLQRYWEALEIINLFLRLAHTSLSTEKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPHSVAAWNCYYKVISRLENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTICSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVVQGLAFLYNNLRICENSQESLYNIARAFHHVGLVTLAVIYYEKVIAMCERDYPIPKLPNENSDIIETHKPGYCDLRREAAYNLHLIYKKSGALDLARQVLRDYCTL* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0867 914 MobiDBLite consensus disorder prediction 9 38 - -
Gso11g0867 914 MobiDBLite consensus disorder prediction 119 142 - -
Gso11g0867 914 SMART tpr_5 826 859 IPR019734 GO:0005515
Gso11g0867 914 SMART tpr_5 176 209 IPR019734 GO:0005515
Gso11g0867 914 SMART tpr_5 244 277 IPR019734 GO:0005515
Gso11g0867 914 SMART tpr_5 314 347 IPR019734 GO:0005515
Gso11g0867 914 SMART tpr_5 142 175 IPR019734 GO:0005515
Gso11g0867 914 SMART tpr_5 421 454 IPR019734 GO:0005515
Gso11g0867 914 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 9 913 IPR039340 GO:0006383
Gso11g0867 914 MobiDBLite consensus disorder prediction 120 134 - -
Gso11g0867 914 ProSiteProfiles TPR repeat profile. 421 454 IPR019734 GO:0005515
Gso11g0867 914 MobiDBLite consensus disorder prediction 1 38 - -
Gso11g0867 914 SUPERFAMILY TPR-like 150 476 IPR011990 GO:0005515
Gso11g0867 914 Pfam Tetratricopeptide repeat 152 206 - -
Gso11g0867 914 Gene3D Tetratricopeptide repeat domain 105 349 IPR011990 GO:0005515
Gso11g0867 914 Gene3D Tetratricopeptide repeat domain 350 520 IPR011990 GO:0005515
Gso11g0867 914 Gene3D Tetratricopeptide repeat domain 575 914 IPR011990 GO:0005515
Gso11g0867 914 SUPERFAMILY TPR-like 387 725 IPR011990 GO:0005515
Gso11g0867 914 Pfam Tetratricopeptide repeat 232 263 - -
Gso11g0867 914 Coils Coil 14 34 - -
Gso11g0867 914 SUPERFAMILY TPR-like 755 910 IPR011990 GO:0005515
Gso11g0867 914 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Gso11g0867 914 Pfam Tetratricopeptide repeat 424 449 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0867 Gso-Chr11 7758891 7776794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0867 K15201 - gmx:100813793 1782.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0236 12 2033432 2058481 Gso11g0867 11 7758891 7776794 GST