Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0860 ATGAACCTGAACATCTCTTTGTGCATGCTTCTCATAGCTCTTGTATTGCGCTTAGGGGGAAGTGCACCCTCTGGCTTCAACTATGGTGATGCCCTTGATAAGAGTCTCATGTTCTTTGAAGCACAAAGGTCTGGTAAGTTACCACTGCAGCAGCGAGTCAAGTGGCGTGGTGATTCTGGTCTCCAAGATGGTTTTCAACAAAGAGTAGACCTGGTGGGTGGGTACTATGATGCAGGAGATCATGTGAAGTTTGGGTTGCCAATGGCCTACAGTGTCACAATGCTTGCATGGGGGGCCATTGAGTTCAACAAGGAAATCACGGACTTGAACCAAATGGGACACGCATTATGGGCAATTAAATGGGGAACTGACTACTTTATCAAAGCACACACTCAGCCTAATGTTCTTTGGGGACAGGTGGGAGATGGAGTTTCTGATCATTACTGCTGGGAGCGTGCTGAAGACATGACAACTTCAAGAGGTGCCTACAAAATTGATGAACAACACCCTGGCTCAGATCTGGCAGGTGAAACTGCAGCTGCATTGGCTGCTGCAGCTATAGCTTTCAGGCCCTACAACTCTTCTTACTCTAATCTCCTCCTAGTTCATGCAAAACAGCTCTTCACATTCGCAGATAGGTTCAGAGGTCTCTATGATAACTCCATATCAAGTGCTCAGCAATTCTATACTTCTTCCGGTTACTCGGATGAATTGTTGTGGGCTGCCACTTGGCTGCACCTAGCAACCGGCAATGAATACTACATAAAGTATGTAGTGGACAATGCTGTGTATATGGGAGGAACTGGCTGGGCTGTAAAAGAGTTCTCTTGGGACAACAAATATGCTGGTGTGCAGATCCTTCTATCAAAGGTGTTACTAGAAGGAAAGGCTGGTGCTTACTCTGCTACACTAAAGCAATACCAGGCCAAGGCAGAATATTTTACCTGTGCTTGCTTGCAAAAGAATGATGATTACAATGTCCAAAAAACACCAGGCGGCTTACTATACGTGCGTGAATGGAACAACATGCAATATGTTTCTTCTGCTGCATTCCTTTTAGCTGTCTACTCTAATTACCTCTCAGCAACAAAATCACAGCTCAACTGTCCAGATGGACAAACTCAGCCTCAGGAGCTCCTCAATTTTGTTAAGTCACAGGCTGACTATATCCTTGGTAAAAACCCTGCGGATGTGAGCTACTTGGTTGGATATGGAGCAAAATATCCTCTTCATGTTCACCACAGAGGCGCTTCCATTGCTTCAGTCTTTGCTCTTCACTATGACGTTGGCTGCACCCAAGGATTTGAGATGTGGTATAACCGTGCTGAGCCAAATCCTAATGTCATCTGTGGTGGCCTCGTGGGCGGTCCAGATAAAAATGATGACTTCTCTGATGAAAGATCCAATTATGAACAAACTGAGCCTACAATTTCAGGTTCTGCTCCTCTTGTAGGCATCTTCGCTAAACTGCAAAGTTTGTATGGTAATATAGGTGAAGGTTACAACCATAATGAATCACCAGTGCCCCAGCAAAAAACACCAAGTACAAATCCAGGGAAAACAACAATGTCCAAGACATCATCAGAATCAGAAGGTGCCCCAGTTGAATTCCTTCACTCAATAAGTAGCTCATGGACTGTTGGAGGAGCAACTTATTACCATCACAGGGTGATAATCAAGAACACTTCTTCGAAGCCAATCTCAGATCTTAAGTTGGTGATTAAGGATCTCTCAGGCTCTTTATGGGGACTCTCGCCAACAGAAGAAAAGGACACCTATGAACTTCCCCAATGGAACAAGGTCTTGAATCCTGGCTCCGAATGTATATTTGTATATGTTCAAGGCGGACCCCAGGCTACAGTCTCGATTAAAAGCTTACATTGA 1884 0.4475 MNLNISLCMLLIALVLRLGGSAPSGFNYGDALDKSLMFFEAQRSGKLPLQQRVKWRGDSGLQDGFQQRVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFNKEITDLNQMGHALWAIKWGTDYFIKAHTQPNVLWGQVGDGVSDHYCWERAEDMTTSRGAYKIDEQHPGSDLAGETAAALAAAAIAFRPYNSSYSNLLLVHAKQLFTFADRFRGLYDNSISSAQQFYTSSGYSDELLWAATWLHLATGNEYYIKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKVLLEGKAGAYSATLKQYQAKAEYFTCACLQKNDDYNVQKTPGGLLYVREWNNMQYVSSAAFLLAVYSNYLSATKSQLNCPDGQTQPQELLNFVKSQADYILGKNPADVSYLVGYGAKYPLHVHHRGASIASVFALHYDVGCTQGFEMWYNRAEPNPNVICGGLVGGPDKNDDFSDERSNYEQTEPTISGSAPLVGIFAKLQSLYGNIGEGYNHNESPVPQQKTPSTNPGKTTMSKTSSESEGAPVEFLHSISSSWTVGGATYYHHRVIIKNTSSKPISDLKLVIKDLSGSLWGLSPTEEKDTYELPQWNKVLNPGSECIFVYVQGGPQATVSIKSLH* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0860 627 PANTHER ENDO-1,4-BETA-GLUCANASE 8 582 - -
Gso11g0860 627 MobiDBLite consensus disorder prediction 500 533 - -
Gso11g0860 627 Gene3D - 25 494 IPR012341 GO:0005975
Gso11g0860 627 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Gso11g0860 627 PANTHER ENDOGLUCANASE 5 8 582 - -
Gso11g0860 627 Pfam Carbohydrate binding domain CBM49 536 614 IPR019028 GO:0030246
Gso11g0860 627 SUPERFAMILY Six-hairpin glycosidases 25 496 IPR008928 GO:0005975
Gso11g0860 627 SMART CBM49_2 535 615 IPR019028 GO:0030246
Gso11g0860 627 Pfam Glycosyl hydrolase family 9 28 486 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0860 Gso-Chr11 7680216 7684821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0860 26 625 Glycoside Hydrolase AT1G48930 67.667 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0860 K01179 - gmx:100812170 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0231 12 1959460 1964047 Gso11g0860 11 7680216 7684821 GST