Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0849 ATGGTGCAATGCGAGAGTGATTGCAGAGAAAAAATGGAGGGAACAGGAGCAGGAACCGCAACAGGGTGTTACAAGTGCGGCAAACCTGGTCACTGGTCACGAGATTGCCCTTTCTCCGCTCCCAATCCAAACCCTAACTCTAACACCGCCACCACTCCCAATCCCAATACTCCAAATCCTTCTTCGTCTTCTTTCAAGTCCAGATCCGCCACCGAAAAGCCCAAGAAGCTCCCCCGAACAAAACCCAAACTCACACCGGAGCTTCTTCTCTCCGACGACGGCCTCGGTTACGTCCTCCGCTATTTCCCTCGCGAGTTCAAATACCGTGGTCGCGGCCACGAGGTTCGCGATTTGGGTAATCTGCTTCGGTTGTACACCGAATGGCACTCTCGCTTGCTCCCTTATTACTCTTTCAATCAGTTTGTTCACAAAGTAGAGAAAGTTGCTGCTACTAGGCGTGTAAAGACTTGCCTTAGAGAATTGAGAGAAAGAGTTGCAAGTGGTGGAGATCCAACAAAACTGCGTGAACCACCTGTTGTGCATGACATTCCATCTGATGAGCACGGATTTTCTGTATCTGCTGAAGATGGGGGAGCAACTCATCAAGAGGCAGATTTGTTTGCAGAATTCGAAAATGTTAATGACATTCAGGAAGATATGCTTAATGATATATATGATAAAGCTACTGAAGAACCTTCTCAGTCCATGCACAATGTGATTGGCACTAGCATGGCTTCAGAAAGTAACGCAACTGAAAAGACATCAGAGGAAAATGGATCCAGCCAGTCTGGCAAAGCTGAGATAACAGAAGAACAGAGAGCCCGTATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGAGCTGAGATAACAGAAGAGCAAAGAGCTCGTATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGTGCTGCCTTATCACAGGCCTCCCAACTTTGA 957 0.4754 MVQCESDCREKMEGTGAGTATGCYKCGKPGHWSRDCPFSAPNPNPNSNTATTPNPNTPNPSSSSFKSRSATEKPKKLPRTKPKLTPELLLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLRLYTEWHSRLLPYYSFNQFVHKVEKVAATRRVKTCLRELRERVASGGDPTKLREPPVVHDIPSDEHGFSVSAEDGGATHQEADLFAEFENVNDIQEDMLNDIYDKATEEPSQSMHNVIGTSMASESNATEKTSEENGSSQSGKAEITEEQRARMEANRLKALERRAEITEEQRARMEANRLKALERRAALSQASQL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0849 318 Pfam Zinc knuckle 22 37 IPR001878 GO:0003676|GO:0008270
Gso11g0849 318 Pfam Replication Fork Protection Component Swi3 83 164 IPR012923 GO:0005634|GO:0006974|GO:0048478
Gso11g0849 318 ProSiteProfiles Zinc finger CCHC-type profile. 23 37 IPR001878 GO:0003676|GO:0008270
Gso11g0849 318 SUPERFAMILY Retrovirus zinc finger-like domains 13 40 IPR036875 GO:0003676|GO:0008270
Gso11g0849 318 Gene3D - 18 60 - -
Gso11g0849 318 PANTHER TIMELESS-INTERACTING PROTEIN 18 288 - -
Gso11g0849 318 MobiDBLite consensus disorder prediction 1 23 - -
Gso11g0849 318 MobiDBLite consensus disorder prediction 245 280 - -
Gso11g0849 318 Coils Coil 266 308 - -
Gso11g0849 318 MobiDBLite consensus disorder prediction 39 68 - -
Gso11g0849 318 MobiDBLite consensus disorder prediction 35 86 - -
Gso11g0849 318 MobiDBLite consensus disorder prediction 245 267 - -
Gso11g0849 318 PANTHER TIMELESS INTERACTING-RELATED 18 288 IPR040038 GO:0000076
Gso11g0849 318 SMART c2hcfinal6 22 38 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0849 Gso-Chr11 7599607 7602951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0849 K10904 - gmx:100808422 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0219 12 1857618 1867401 Gso11g0849 11 7599607 7602951 GST