Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0728 ATGTTCATAAAGAAGCTCGTGGAGAAAGCATCCATAAAGATGCCTCTTGGAAATTCATTGGATGGGTTAAAAGGTAGTGATGTAGATCCACGTTTGGTATTTCATCAAGGGGTACCATCTGGTGGTGCCAAGTTTGCCTATGACAATATTCAGAAGATACTGGCCCTATCTACCAAGGATGGACGGATTAAACTATTTGGAGAGGATAATGCCCAAGTCCTACTTGAATCTAAAGAGCCTGTGCCTAGCAAGTTTTTACTGTTCATTCAGAACCAAGGCATCCTTATAAATGTCACTTTCAATAACCATATTGAGGTTTGGGACATAGACAAGAAACTGTTGTCTGATGTGTACATTGTTAAGGAAGAAATCACTTGTTTCTCAGTCATTAAACATAGCCTCTTTATGTATATTGGATTTTCTAATGGCAATATTTCAGTTTTGATGCTTGATCAAGAACCATGGCATGTGGTACGTATGAAATACACCATACCCCTTTCAGCTTCTTATGGAAATTCAACTGAAGAATCTGACGATACAGTGGTGACACACGTACTGCCTCAACCAGCAGCCGAGAGTCAGAGAGTTCTCATAATCTTTAGAAATGGCCAAATAATATTATGGGATATTCGAGAAATCAGATCAATTTTCAGAACTGGTGGGAAAATATTGCAGACAAGATATAATGAAACAAGGAAGGTGTCTTCTGCTTGTTGGGTGTGTCCTTTTGGAAGTAAGGTGGTTGTAGGGTACAACAATGGAGAGCTCTTCATTTGGAGCATCCCTTCTCTAAACACAGGAAATAGTTTAGCAACTGATTATAATAGTCAAAACACTCCTATGTTCAAATTTAATTTAGGATATAAATCAGACAAAACTTCTATAGGATCAGTAAAATGGATTTATGCTGAAGGAAAGGCTAGTCGACTATATGTTATGGGAGGTTCTGATTATGCCCCTTCAAACTTGTTGCAGGTAGTGTTGTTGAATGAGCATACAGAATCTCGCACAATTAAGATGGGGCTTCATTTGCCAGAAGGTTGTATTGACATGGAGATCATATCAACCTCAAGCAAGCATAGACAAAATTATTTCATTTTGCTTGGGAAATCAGGCCACGTATATCTATATGATGATAATTTGATTGAAAGGTATCTACTGCAAAGCCAGTCTAAGTCCAGTCCTTCACTGCCAAAGGAAGTGGTTGTGAAGTTACCACTGGCAGATTCAAACATCACAACAGCAAAATTCATCTCCAACAATTCCAATTTTTTTAGTTCTGAAGATGAGTATTACAATCAGCTGGTAAAGAATTATCCACCACTTGTTCCCATTGAAACAAATCTCAAAGATGGGATTAACTTCAGTTCTTCCAATTTCACTGGATTTTCAAACATTAGAAACATGTACATAACTGGACACAGCAATGGAGCCATAAATTTTTGGGATGCAACATGTCCCTTTTTCACCCCAATTTTGCAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCCTTGACGGAATTATATTTTGATAGCAACTCTCCACTCCTTTTTTCTGGTGACCAAAGTGGAATGGTTCGTATCTATAGATTCAAACCTGAACCATATGCCTCGAATAGCTTCATGTCCCTTACAGGAGGTACAAAGAAAGGGACCGATCACGTAATCCACAGTATGAAACTTATAAAGACTAGTGGTACTGTAATTTGTATGAACATAGATCACAGCTCAAGGCATCTTGCTGTTGGTTCTGACCAAGGAAATGTTTCAGTTATCAACATAGATGGACCATCTTTGTTATATCGGAAACATATTGCAAGTGAAATTTCCACCGGTATCATCTCCCTGCAGTTCAAAACCTGCAGTTTGCATGGTTTTGAGAAAAACATTTTAGCAGTTGGAACAAAGGACTCGTCTGTTCTAACACTAGATGGTGAAACTGGAAACACATTGAGCATTGGAACTATTCATCCTAAGAAGCCCTCTAAAGCTATATTTATGCAGGTGTTGGATGGACAAGGAGAACAAACCGCAGGATCAGTTACAAAAGATGGCTTAGAGTTGAAAGAAGGGATTCATATTGAAGATGCAACAGCAAAGCAGTTGTACATTCTGCTGTGTTCTGAGAAGGCTTTGTATGTCTATTCTTTTGCACATGCTGTACAGGGTGTTAAAAAGGTGCTTTACAAAAAGAAGTTTCATTCCTCTTCCTGTTGCTGGGCATCAACAATTAACAGCCTCTCTGATATTCGTCTTATACTCCTTTTCGCCAGTGGAAAAGTAGAATTAAGGTCTTTCCCAGAGTTAACTCTAATAGTGGAGACTTCAGTTAGAGGTTTCACTTATTCACCTCCAAAATTGAAGTCATTTTCTGATAGCCAGATATGTTGTTCATCCAAAGGAGATCTTGTTTTGGTGAATGGTGACCAGGAAATTTTTGTGGTCTCATTGTTGGCCCAGAGGAATATTTTCAGGCTTTTGGACTCTGTTAGCTGCATCTACAGGAAGGAAAGGATGCCATCACAAGAAGAGCTTGTTCCTGGCCCTGTCATCCATAAGGAAAAGAAAAGGGGTATATTCAGCTCTGTTATCAAAGATTTTACTAGCAGTAAAGAAAAGCATGCACCCCTCTTGGAAAAGAAAGATCCCAAAGAAAGTATACGGGAACTCTCAGCAATATTCTCAAATGCAAACTTTGCATGTAATGATAATGTTGATAAGCCAACAATGGATGAAAATCAGCTTGAATTAAACATAGATGATATTGACCTAGAGGATCATGTAGAAAAACGCAAAGAACAAAGCATATTGGGAGCTCTTAATAAGAAGAAATTGGCTGGCACATTTCAATCTCTGAAAGGAAGATTGAAAGAGATGAAGGGAAACAACCAAAAAACATCAGTTAAGGAAGGGCAACAGGATCAAAAAGATGGTGCGCTTGATCAAATTAAGAAGAAATATGGGTTTTCTTCTTCCTCCAATGAATCAGCCGTGGCAAATCGGGCACAAGTCAAACTGCATGAAAACATAAGGAAATTGCAGGGTACCAACCTTCGTGCCACAGAGATGCAAGATATAGCAAAATCATTTTCATCATTGGCCAAACAAGTGCTGCGAACTACTGAGCAGGATAGACGAAGTTGA 3159 0.3856 MFIKKLVEKASIKMPLGNSLDGLKGSDVDPRLVFHQGVPSGGAKFAYDNIQKILALSTKDGRIKLFGEDNAQVLLESKEPVPSKFLLFIQNQGILINVTFNNHIEVWDIDKKLLSDVYIVKEEITCFSVIKHSLFMYIGFSNGNISVLMLDQEPWHVVRMKYTIPLSASYGNSTEESDDTVVTHVLPQPAAESQRVLIIFRNGQIILWDIREIRSIFRTGGKILQTRYNETRKVSSACWVCPFGSKVVVGYNNGELFIWSIPSLNTGNSLATDYNSQNTPMFKFNLGYKSDKTSIGSVKWIYAEGKASRLYVMGGSDYAPSNLLQVVLLNEHTESRTIKMGLHLPEGCIDMEIISTSSKHRQNYFILLGKSGHVYLYDDNLIERYLLQSQSKSSPSLPKEVVVKLPLADSNITTAKFISNNSNFFSSEDEYYNQLVKNYPPLVPIETNLKDGINFSSSNFTGFSNIRNMYITGHSNGAINFWDATCPFFTPILQLKQQSENDFSLSGIPLTELYFDSNSPLLFSGDQSGMVRIYRFKPEPYASNSFMSLTGGTKKGTDHVIHSMKLIKTSGTVICMNIDHSSRHLAVGSDQGNVSVINIDGPSLLYRKHIASEISTGIISLQFKTCSLHGFEKNILAVGTKDSSVLTLDGETGNTLSIGTIHPKKPSKAIFMQVLDGQGEQTAGSVTKDGLELKEGIHIEDATAKQLYILLCSEKALYVYSFAHAVQGVKKVLYKKKFHSSSCCWASTINSLSDIRLILLFASGKVELRSFPELTLIVETSVRGFTYSPPKLKSFSDSQICCSSKGDLVLVNGDQEIFVVSLLAQRNIFRLLDSVSCIYRKERMPSQEELVPGPVIHKEKKRGIFSSVIKDFTSSKEKHAPLLEKKDPKESIRELSAIFSNANFACNDNVDKPTMDENQLELNIDDIDLEDHVEKRKEQSILGALNKKKLAGTFQSLKGRLKEMKGNNQKTSVKEGQQDQKDGALDQIKKKYGFSSSSNESAVANRAQVKLHENIRKLQGTNLRATEMQDIAKSFSSLAKQVLRTTEQDRRS* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0728 1052 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1051 - -
Gso11g0728 1052 Pfam Lethal giant larvae(Lgl) like, C-terminal 585 834 IPR013905 -
Gso11g0728 1052 CDD R-SNARE_STXBP5_6 987 1047 - -
Gso11g0728 1052 Gene3D - 42 380 IPR015943 GO:0005515
Gso11g0728 1052 SUPERFAMILY WD40 repeat-like 361 663 IPR036322 GO:0005515
Gso11g0728 1052 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1051 - -
Gso11g0728 1052 SUPERFAMILY WD40 repeat-like 51 598 IPR036322 GO:0005515
Gso11g0728 1052 Gene3D - 442 675 IPR015943 GO:0005515
Gso11g0728 1052 SMART WD40_4 557 598 IPR001680 GO:0005515
Gso11g0728 1052 SMART WD40_4 220 260 IPR001680 GO:0005515
Gso11g0728 1052 SMART WD40_4 496 535 IPR001680 GO:0005515
Gso11g0728 1052 SMART WD40_4 398 483 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0728 Gso-Chr11 6494750 6505245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0728 - - gmx:100782049 2038.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0728 11 6494750 6505245 Gso11g0728 11 6494750 6505245 ECH
Gso11g0728 11 6494750 6505245 Gso16g0942 16 25932183 25947816 PCT
Gso16g0942 16 25932183 25947816 Gso11g0728 11 6494750 6505245 PCT