Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0355 ATGGCAGACTTACCAGGGTATCTTCATGCCTGTTTGAACACAGGGAAGCTTGCCTCCTTGGCAATTTTGGTGTCTGGAGGAATCGTCTTGCAAATTTTGGCATGTGCCTTGTATAATAACTGGTGGCCGATGCTGAGTGTGTTAACGTATGTGCTTCTTCCAATGCCTTTGCTGTTCTTTGCGGGGTCTGATGATTCTATATTTTCTGAATCTGATAATAGCTGGGTAAATTTTACTAAGTTCTTGACTGGAGCCTCAACTGTGGGAGGCATTGCCATTCCAAGCATATTAAAGCATGCTGGGGTTATCGGTTGGGGAGCCTTTGCAATGGAACTCTCTTCCTACTTTGTGTTTGGAATGGCCGTAATATGTTACCTTTGGATGAGTGGTGATGATGATTACAGTATCCTATGA 414 0.4372 MADLPGYLHACLNTGKLASLAILVSGGIVLQILACALYNNWWPMLSVLTYVLLPMPLLFFAGSDDSIFSESDNSWVNFTKFLTGASTVGGIAIPSILKHAGVIGWGAFAMELSSYFVFGMAVICYLWMSGDDDYSIL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0355 137 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
Gso11g0355 137 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
Gso11g0355 137 Pfam Vacuolar protein sorting 55 18 132 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0355 Gso-Chr11 3027526 3029976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0355 1 135 EF-hand Containing Proteins AT1G32410 70.290 7.49e-64 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0355 - - gmx:100306202 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1723 1 54004761 54007277 Gso11g0355 11 3027526 3029976 GST
Gso11g0355 11 3027526 3029976 Gso17g1287 17 12697998 12700195 PCT
Gso17g1287 17 12697998 12700195 Gso11g0355 11 3027526 3029976 PCT