Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2139 ATGGAGATTATTCAAGCTTCTAACGAGGGAAGACAGACGTCAATGGGTTTGGTGTACGAGCAATTTATATGGGCATTTCTTGTTGGGTGCACGTTCATTAGTGTATTATCTCATCCTGATGAAGCAGCTCCAAAGTACACATTTTTAAAAGAAGCAACATCTGCTCCACAAATCTTAACTTATGACTACATAGTGATTGGTGGAGGAACATGTGGGTGTCCACTAGCAGCAACTCTCTCACAAGGTGCAGGAGTTTTAGTCCTTGAAAGGGGGGGCTCTCCTTACACAAACCCTGAGCGAATCAACATAAAGAACTTTGGGAATTCCCTCGTTGACATAAGCCCTTCATCATTTTCCCAGCCATTCATATCCAGAGATGGTGTCCTCAATTCGCGGGCTCGTGTCCTGGGTGGTGGCTCTGTCGTGAATGCAGGATTCTATTCAAGGGCTAGCTCCACCTACATAAGAGATTCTGGTTGGAATGAAACTTTGGCTGAGGACTCATATATATGGGTTGAAAAAAAAGTGGTCTTTGAGCCCCTTCTGATGCAGTGGCAATCAGCAGTCAGGGATGGATTACTTGAAGTAGGTGTGTTGCCCAACAATGGTTTTACTTTTGATCACTTATATGGGACTAAGGTTGGAGGGACAATTTTTGATAAGGAGGGTAACAGGTACACAGCAGCTGATTTGTTAGAGTATGCTGATCCCAAGAGAATTTCTGTTTATCTCCATGCCACGGTGCAGAAGATACTATTTAAGTATAACACAGAAAAAAGAAGGCAACAAGCTTATGGAGTAATTTTCAAAGATGCATTGGGAGTGATGCATAGAGCATACTTAAGCACACAAGGAAAGAGTGAGATAATCTTATCAGCTGGTGCAATTGGAAGCCCACAGTTGCTGATGCTAAGTGGGATTGGTCCTGCAAACCATCTTCAAGCTCATGGAATAAAAGTGGTTTTGGATCAGCCCTTTGTGGGTCAAGGGATGGCAGATAATCCATTGAATGTTCTAGTGGTTCCTTCCCCTGTGCCTGTTGAAGTCTCTCTTGTCCAAACAGTGGGCATCACTAAGTTTGGTAGCTTCATTGAAGCAGCCAGTGGACTGAGCTTGGGCCATTCTTGGTCGGAAAGGCTTCAAGGGATTTTTGAATTTGTGTCAAACCAGTCTGGTGAGCCTTCCACGTTTCCCCCAGAAGCTAAGGAGAGTGTTGCAGACACTATTAGATTTTTAACCAATCCAACTCTTAAAGGAGGAGTCATAGGTGAAAAGGTCACAGGACCACGCTCTACGGGTCATTTGGAGCTTATAACCACAAATCCCAATGATAACCCATCAGTTACCTTCAACTATTTTAAGGATCCAGAAGACTTAAAGAAGTGTGTTGAAGGCATGAGAATCGTCATAGATGTGATAAACTCAAAAGCATTCTCAAAGTTTCGCTACCACAACATGCCGGTCCAAGCTCTAATAGACTTGATGTTGCACTTACCAGTTAACTTGAGGCCTAAACATGCTAATGCTGCCTTCTCTTTAGAACAGTATTGCATAGACACTGTGCTAACAATTTATCATTACCATGGAGGGTGCCAATCTGGTAAAGTTGTCGATCATAATTATAAGGTTATTGGTGTTGAAGCTTTGAGGGTAATTGATGGATCCACTTTTCATGGCTCACCGGGTACAAATCCTCAAGCTACTGTAATGATGCTTGGAAGGTATATGGGAGAAAAGATTATAAAGGAAGATTCTTCCATAGGCGGAAGTGAAGGGATCAATTGA 1785 0.428 MEIIQASNEGRQTSMGLVYEQFIWAFLVGCTFISVLSHPDEAAPKYTFLKEATSAPQILTYDYIVIGGGTCGCPLAATLSQGAGVLVLERGGSPYTNPERINIKNFGNSLVDISPSSFSQPFISRDGVLNSRARVLGGGSVVNAGFYSRASSTYIRDSGWNETLAEDSYIWVEKKVVFEPLLMQWQSAVRDGLLEVGVLPNNGFTFDHLYGTKVGGTIFDKEGNRYTAADLLEYADPKRISVYLHATVQKILFKYNTEKRRQQAYGVIFKDALGVMHRAYLSTQGKSEIILSAGAIGSPQLLMLSGIGPANHLQAHGIKVVLDQPFVGQGMADNPLNVLVVPSPVPVEVSLVQTVGITKFGSFIEAASGLSLGHSWSERLQGIFEFVSNQSGEPSTFPPEAKESVADTIRFLTNPTLKGGVIGEKVTGPRSTGHLELITTNPNDNPSVTFNYFKDPEDLKKCVEGMRIVIDVINSKAFSKFRYHNMPVQALIDLMLHLPVNLRPKHANAAFSLEQYCIDTVLTIYHYHGGCQSGKVVDHNYKVIGVEALRVIDGSTFHGSPGTNPQATVMMLGRYMGEKIIKEDSSIGGSEGIN* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2139 594 SUPERFAMILY FAD-linked reductases, C-terminal domain 331 530 - -
Gso10g2139 594 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 18 583 - -
Gso10g2139 594 Pfam GMC oxidoreductase 429 574 IPR007867 GO:0016614
Gso10g2139 594 SUPERFAMILY FAD/NAD(P)-binding domain 59 583 IPR036188 -
Gso10g2139 594 Pfam GMC oxidoreductase 240 335 IPR000172 GO:0016614|GO:0050660
Gso10g2139 594 Pfam GMC oxidoreductase 61 156 IPR000172 GO:0016614|GO:0050660
Gso10g2139 594 ProSitePatterns GMC oxidoreductases signature 2. 294 308 IPR000172 GO:0016614|GO:0050660
Gso10g2139 594 Gene3D - 178 523 - -
Gso10g2139 594 PIRSF Alcohol_oxidase 42 590 IPR012132 GO:0050660
Gso10g2139 594 PANTHER OSJNBA0019K04.7 PROTEIN 18 583 - -
Gso10g2139 594 Gene3D - 61 573 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2139 Gso-Chr10 48420005 48424253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2139 23 591 Miscellaneous Gene Families AT3G56060 59.790 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2139 - - gmx:100780453 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2139 10 48420005 48424253 Gso10g2139 10 48420005 48424253 ECH
Gso20g1240 20 42429634 42432648 Gso10g2139 10 48420005 48424253 GST